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ET12769

CSHL Arabidopsis genetrap mutant lines

Original: ET12769

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12769

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15684014 [Map]; Strand: w
      • AT4G32500.1 - [+] show detail - K+ transporter 5
        Distance: 0; Region: intron9 (CDS)
    Flanking Genome Sequence: ET12769 - 3-prime edge
    AGAGGTATTT TACCCGACGT TACCGACCGT TTTCATCCCT AGGGATGAAA 
    GTAGGATGGG AAAATCCCGT ACCCGACCGG ATCGTATCGG TTCATCTCAC
    TCGACTACCN CGNGTGAGTA ACTGATGCAG GTGTAAATCG TCTCCTCTGG
    CTGCTGGGAT CTTAAGCTGA GAGGTCGGTC CCTGTTCCCG TGAAGCTACA
    TGCGTTCTGT GTCCGCCTAG ATGCCTTTCA TCACTGGATC TGTTGAGTCT
    TTCAGATGCT GCATTAGACC AAAACATATC CCAGATGAGA AAAAATAGTC
    AAACCAGCTA AAATGTTGTA GTCACTATGG ATTTATACGG AAATAGCTTC
    GGACTAACCT GAAGAAGATT ATTCATGATT ATTGCCCCAT CACCAACGTT
    TGCCTGAACA AGATTTAAGA ATGCTGTACG GTTCAGACGA AGCAATTGAC
    TCACTCGTTT GGTTCGAACT GTGAACAACT GTGGCCTGTA ACATAGAACC
    C

AT4G32500.1

Model type
Protein coding
Short Description
K+ transporter 5
Curator Summary
Encodes AKT5, a member of the Shaker family potassium ion (K+) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).
Computational Description
K+ transporter 5 (KT5); FUNCTIONS IN: inward rectifier potassium channel activity, cyclic nucleotide binding; INVOLVED IN: potassium ion transport, N-terminal protein myristoylation, ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Shaker pollen inward K+ channel (TAIR:AT2G25600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR