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ET12812

CSHL Arabidopsis genetrap mutant lines

Original: ET12812

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12812

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 650325 [Map]; Strand: c
      • AT4G01515.1 - [+] show detail - transposable element gene
        Distance: -531; Region: promoter
    Flanking Genome Sequence: ET12812 - 3-prime edge
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAACCAT 
    AACTCTATCG GATAAACTTA TGTAAGAAAA GAATGAAAGT ACCAGTACCA
    GATTAAGATG AGGCAAGGAA GTGATCTTAT ACTCGTGCAT AACCCAACGA
    CTACTCTCAC CCTTGGCTTT AGGAGCATCA AGGTCATCGA ACCAGAAGAC
    CCTGACTTCT CCAATCTTGT TTCTACTCTG ATCTGATTAC CGTTTTAACG
    CCACTGTTTT TCCATTTCCA AGTTTTGATA CTTCTCTTCC TGGCTTATGT
    TTTAATTTCT TACGCTTTCT CACATATAAA AATGGTAGTT TTCTCAGAAA
    ATTAATTAAA AGTTGTATCT ATCACTGGCT TAGTGGGTCA TTAAATTACG
    GCACATGAAC CTGATACAAC ATTAGTGTAA CAGAGTTGAA ATATGTGGTA
    TGAGTTAAAT GATAATTCAC AAAAACAATT GTTATGATAA TACTAGAATG
    TCAACCCGTA CGTAGTACGA GTAAAAGAAA ACTATTGTAT ATGGTAGGTG
    ACT
  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: ET12812 - 5-prime edge
    CAGTTTCTAT TTTTCCATAT TTTACTTTAA TCTTCAG

AT4G01515.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.1e-18 P-value blast match to GB:AAB41224 ORF2 (LINE-element) (Rattus norvegicus)
Link
InterPro Scan - TAIR