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ET12837

CSHL Arabidopsis genetrap mutant lines

Original: ET12837

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12837

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13395530 [Map]; Strand: w
      • AT4G26540.1 - [+] show detail - Leucine-rich repeat receptor-like protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT4G26542.1 - [+] show detail
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET12837 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    AATCTCCCTA ACGGTAGCTT GAGTTCTCGG CTTCACGGCG CCGGAAAAGG 
    AGGATGTGTT GATTGGGAGG CGCGATACGA CGTCGTTCTT GGTGTGGCCC 
    ATGCACTTGC TTATCTCCAC CATGATTGTC TCCCCACAAT TATACATGGT 
    GACGTTAAAG CTATGAATGT CTTATTGGGT CCTCACTTTG AACCCTACTT 
    AGCTGATTTC GGTTTAGCTA GAACCATCTC CGGTTATCCA AATACCGGAA 
    TCGATTTAGG GAAACCCACC AATCGGCCTC CGATGGCTGG CTCCTATGGT 
    TACATGGCTC CAGGTAAGCT TGAGAAAGTA CTTGTACACT TAACTAAGTT 
    TGGAGTTTTG ATTTTGATTT GTTTTGTTTG TTGGGTTTTA CAGAACATGC 
    TTCGATGCAA CGTATTACCG AGAAGAGCGA TGTTTATAGT TACGGGGTGG 
    TATTGTTAGA GGTTTTAACC GGAAAGCATC CGTTAGATCC GGATCTACCA 
    GGAGGTGCAC ATTTGGTTAA GTGGGTGAGA GATCACTTGG CTGAGAAAAA 
    AGATCCTAGC AGGCTTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13395619 [Map]; Strand: w
      • AT4G26540.1 - [+] show detail - Leucine-rich repeat receptor-like protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT4G26542.1 - [+] show detail
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET12837 - 5-prime edge 
    TTTCAGATTC CGATTAGAGC ACCAACCAAG AAGACGAACG ATGTTTCTGT 
    GACGAATCGA TCCTAGAGTT TTAATCTCGG AGTTAAACGC ACCACTCTCT 
    TCCTTTGACC ACATTTTCTT CACCGCGAGT GACTCGCCGG AGGGAATCGT 
    TATACGGTAA ACCACACCGG AGCTTCCGGT TCCGATCACG TTTGCTGACG 
    TCAGATTCTT AACAATGTCG TCGATTGAAA AATCGAGTTT TTGGTAAAGC 
    GTCACTTCCC ACGAATCTAT TTCATCTCAC TCGA

AT4G26540.1

Model type
Protein coding
Short Description
Leucine-rich repeat receptor-like protein kinase family protein
Computational Description
Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: inflorescence meristem; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G56040.2); Has 218237 Blast hits to 120439 proteins in 3896 species: Archae - 151; Bacteria - 20470; Metazoa - 64079; Fungi - 7848; Plants - 101542; Viruses - 308; Other Eukaryotes - 23839 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G26542.1

Model type
Other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT4G26540
Link
InterPro Scan - TAIR