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ET12864

CSHL Arabidopsis genetrap mutant lines

Original: ET12864

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET12864

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16439444 [Map]; Strand: w
      • AT3G44970.1 - [+] show detail - Cytochrome P450 superfamily protein
        Distance: 4596; Region: intergenic
      • AT3G44980.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -1579; Region: intergenic
    Flanking Genome Sequence: ET12864 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    TTTCAGACCC TCATTTGTTC ACTACAAGAA AATTAGAAAC ACTTGTTCTT 
    GCTTTGGCTC GCTGCAAATA ATAAGCTTAC CACTGGTGAG TGTATATCAT 
    ATTGGAACAA GTGATTAAAT CCATTGTGTG TT

AT3G44970.1

Model type
Protein coding
Short Description
Cytochrome P450 superfamily protein
Computational Description
Cytochrome P450 superfamily protein; FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, shoot, cotyledon, hypocotyl, leaf; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 2 (TAIR:AT5G48000.5); Has 31585 Blast hits to 31508 proteins in 1695 species: Archae - 52; Bacteria - 6275; Metazoa - 10768; Fungi - 5445; Plants - 7650; Viruses - 6; Other Eukaryotes - 1389 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G44980.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G07215.1); Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR