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ET12887

CSHL Arabidopsis genetrap mutant lines

Original: ET12887

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12887

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 590079 [Map]; Strand: c
      • AT2G02220.1 - [+] show detail - phytosulfokin receptor 1
        Distance: -2955; Region: intergenic
      • AT2G02230.1 - [+] show detail - phloem protein 2-B1
        Distance: 142; Region: intergenic
    Flanking Genome Sequence: ET12887 - 3-prime edge
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    AGAATCATGG ACAAATGGTT TCAGCTACAG GGCATGACTA AGCAAAAGAG
    TGTTGAACCA AGACTCAAGA TGACATGTAT GGATGTGGAA ACAGGAAACA
    GAAGAAAGAT AGTCACAATG GTGAAATGAA TGGGAAACAT AAGAATCATG
    AACCATCTTT CTTCTTGCTA TTCAGACATT AGTACACAAG ATAGAGAATT
    ATCAACTTCT CTGCTATTTC ATATCAAGAA CTCCAAACTG TAAGTAAACT
    CGAGACATTA GAAGACATGT TTTTAAAACT GTGTTTCATA CTTCAAAATA
    CACAATTTGA TCAAAATCAG TTGCTTCTTT CAGGCCTGAT CTCAATTCCC
    TGAATAATCA AACCACTCTT CCAATTTCCA TTCTGAGTCT CCATTATACT
    AATCTCAATC TCATCACTAC CATCATCACC ACAACCTCCA TTGTTAATGT
    AAAACTTTCC AAGCTCCACT TCACTCCACC CATCTACTCT CTCCTTTGGC
    CCCACCACAT TCATACCACG CTCCCTTTCT CCTCAACTTC TTC

AT2G02220.1

Model type
Protein coding
Short Description
phytosulfokin receptor 1
Curator Summary
Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ).
Computational Description
phytosulfokin receptor 1 (PSKR1); FUNCTIONS IN: peptide receptor activity, protein serine/threonine kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, response to wounding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phytosylfokine-alpha receptor 2 (TAIR:AT5G53890.1); Has 188205 Blast hits to 128830 proteins in 4018 species: Archae - 120; Bacteria - 18455; Metazoa - 56562; Fungi - 9680; Plants - 79633; Viruses - 405; Other Eukaryotes - 23350 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02230.1

Model type
Protein coding
Short Description
phloem protein 2-B1
Computational Description
phloem protein 2-B1 (PP2-B1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G02240.1); Has 552 Blast hits to 533 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 552; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR