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ET12965

CSHL Arabidopsis genetrap mutant lines

Original: ET12965

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12965

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2335780 [Map]; Strand: c
      • AT3G07330.1 - [+] show detail - Cellulose-synthase-like C6
        Distance: 0; Region: exon5 (3UTR)
    Flanking Genome Sequence: ET12965 - 5-prime edge 
    GCCTACCTGT CTTTGTTGTG GTATTAAGCC AAACCTTGGT TTTTTGTTGT 
    GCAAAAATTG TTGTTAGGTT GTTGGTTTTT TGTTTCGGAT GATGTGGCAG 
    AAACATATTT TAAGCTTTGC TCTAATGCCA CTCTCAAATT CTTTGTTGTT 
    GTTGTTGTTT CTCTCCTAAG GGTTCATTTA TTTATATACA CACTTCTGAA 
    TTGAAATGTA CCATTTCTTT TTTAAATCTG TTGTCTTCAT CTTTTAGTAT 
    TTGTTATGCT AATTTTGGGC CTCTTCTATC TTAAGTTATA AGGACCAGAA 
    TCTGTTTGAC AATCTCTTAT ATGATTTAAG GCCCAATTTC CCTCAGTTCT 
    CTTAGATCAA GCACAAATGA TTCGAGTTTT GTGATTGAAT TTATACCGGG 
    AACTTTTTTT CCATAAAAAG TCAAAACACA GATGTTAAAA ATTGTCCCGA 
    CTGCAAAATG TATAATGTAC AAAACATATG ACATATGTTT TCGACCTAAC 
    AA

AT3G07330.1

Model type
Protein coding
Short Description
Cellulose-synthase-like C6
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
Cellulose-synthase-like C6 (CSLC6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: pollen tube development; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Glycosyl transferase family 2 protein (TAIR:AT2G24630.1); Has 4986 Blast hits to 4983 proteins in 1463 species: Archae - 182; Bacteria - 3875; Metazoa - 9; Fungi - 97; Plants - 510; Viruses - 14; Other Eukaryotes - 299 (source: NCBI BLink).
Link
InterPro Scan - TAIR