1. Home
  2. Mutant Lines
  3. ET12979

ET12979

CSHL Arabidopsis genetrap mutant lines

Original: ET12979

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12979

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 194522 [Map]; Strand: c
      • AT4G00440.1 - [+] show detail - Protein of unknown function (DUF3741)
        Distance: 0; Region: exon1 (5UTR)
      • AT4G00440.2 - [+] show detail - Protein of unknown function (DUF3741)
        Distance: 0; Region: exon1 (5UTR)
      • AT4G00440.3 - [+] show detail - Protein of unknown function (DUF3741)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET12979 - 5-prime edge 
    CCTACTTTCT CCGTTTGAGC AAAGCCATAG AAAATCCAAT ATATATAAAA 
    AAAGTGTTGC AAGTTGCAGC AGCAGAGGTA AATTCCAAAA CTTTCTTTCG 
    TTTGATACCA AGACTTAAGG TTTCTCCTGA ACCAGCTTTG ATCGCCGGAC 
    AAAACGGTAG AAGAAGAAGA AGAAGAAAAT TGAGATTTCT TCAAAGCCAA 
    GGCCGAGAGA GAGAGAATGA AGAAGATTAA GCAAAATGAT AGCTTATAAA 
    GTTGAAAACA GAGGAAAAGT TGATGATCCA ATCTCCAAGC CACATTGTTT 
    CATCTGACAA CTTTTCCAGG TTCTGTCTGA TAAAAACCCC CCCAAGCTTC 
    CGTAATCATA CACGATCAAA TCAACAACAA AGGCGGAGAA AAAAGGATCA 
    TAAAAAATGC ATCTTTAAAT TTCCAAAGTT GATGAACAAC CCAACCCAAT 
    AGAATAGAAT AAACCTTCTT CTTACTGTTC AACATTCAAA TAAAAAAGAG 
    ATCTTTTTTT CCTCATTTCT GTGTTGGGGG GCATCTTTT

AT4G00440.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3741)
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1239 Blast hits to 1045 proteins in 162 species: Archae - 0; Bacteria - 74; Metazoa - 262; Fungi - 79; Plants - 239; Viruses - 0; Other Eukaryotes - 585 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00440.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF3741)
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1283 Blast hits to 1059 proteins in 155 species: Archae - 0; Bacteria - 77; Metazoa - 265; Fungi - 74; Plants - 239; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00440.3

Model type
Protein coding
Short Description
Protein of unknown function (DUF3741)
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1283 Blast hits to 1059 proteins in 155 species: Archae - 0; Bacteria - 77; Metazoa - 265; Fungi - 74; Plants - 239; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink).
Link
InterPro Scan - TAIR