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ET12991

CSHL Arabidopsis genetrap mutant lines

Original: ET12991

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12991

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3479 [Map]; Strand: w
      • AT3G01015.1 - [+] show detail - TPX2 (targeting protein for Xklp2) protein family
        Distance: 0; Region: exon1 (CDS)
      • AT3G01010.1 - [+] show detail - UDP-glucose/GDP-mannose dehydrogenase family protein
        Distance: -863; Region: promoter
    Flanking Genome Sequence: ET12991 - 5-prime edge 
    TACTTTCTCC CTGGAAGCAA GTAAGCTTCT CAAAAGCTTT AACTAGATGC 
    ATCACTTTAC CAAATTCAGG TATACTCATT CTCGCTTCTT CCAATACTTT 
    TTCTCTTCTC CTCTTCATCA AAGAAACCCT AGTTTCATCA GAATCTCCAA 
    ATTCGACTTG TTCATTTCCA TCCTCCAAAT TCTGGCTGGA TTCTCCAATT 
    TCTGATACGG ATTCTCTTCG ATTGTTGAAG AACTCTTCCT GTGACGCCCG 
    TAGAGTTTCG TATGCTATAC AGACACATTT CTTCATATTG GAAATGGTCT 
    TAGCTCCACA TTTGCAATCC ACAGACGCGG AATCATTCTT CTCCTTCCTT 
    GAATTCTTCT TCACCACCAC GAACCTCCTC TCTCTGATCC GATTCCGTGG 
    TGAGAAAACC GCCGGAACAG GATTAGGCTT CCATTTCGGA TTCTTCTGCG 
    CAGAAGATTT ACTCGATTTC TCGAGTGGAG TCGAGTGTGA GACGAAGTTA 
    GGGTTAGAAT TCTCGGAGAA TCGTGAAACC TCTTGAGCCT TGGATTGAAA 
    ACTGATCGGA TCCATCACCA GAGTCTCGTG TTTAGCATTC TTCAAATTCG 
    TCGACTCCAT CGAAAGATGA GAGCAGAAAA ATGTGAGAAA TTAGGGTTTT 
    GTCTTTTCGA GTGAGTAAAG GGAAGAAGAA GAAGAGAGAG GGAGAGGAGG 
    GAATTGTCTG ACCGTTGCGA CTTGTGAGGA AGCTCTCGAC TTTGTATGTA 
    ACGGCTCGCT CAGTCATTTA CTGGATTTTC GTAATTACTA CGATTAATTG 
    CTTAATTTCA AAAAAAATTA GTTTAATGCT GGAATCTAAT ATGTTT

AT3G01010.1

Model type
Protein coding
Short Description
UDP-glucose/GDP-mannose dehydrogenase family protein
Computational Description
UDP-glucose/GDP-mannose dehydrogenase family protein; FUNCTIONS IN: NAD or NADH binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT5G15490.1); Has 4547 Blast hits to 4540 proteins in 1270 species: Archae - 101; Bacteria - 2703; Metazoa - 193; Fungi - 72; Plants - 179; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G01015.1

Model type
Protein coding
Short Description
TPX2 (targeting protein for Xklp2) protein family
Computational Description
TPX2 (targeting protein for Xklp2) protein family; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT5G15510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR