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ET13005

CSHL Arabidopsis genetrap mutant lines

Original: ET13005

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13005

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4948011 [Map]; Strand: c
      • AT1G14450.1 - [+] show detail - NADH dehydrogenase (ubiquinone)s
        Distance: -435; Region: promoter
      • AT1G14455.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13005 - 3-prime edge 
    ACGGTAGAGG ATTTTACCGA CCGTTACCGA CCGTTTACAA AATCAGGCAT 
    AAACATGGTG TTCTTGTCGT TAGCGACTTG GCTTGGTGGA TGATGACCAT 
    GTCCTGGAGG AGGAGGATCT TTTGCAGGAG AAGATGGAAC TGTTGGGCCT 
    TTTCCTGGTG GTGAATGACC ATGATAACCT GGAGGAGTAT GTTTTGAAGG 
    AGGATATGGA ACTGTTTGGA TTTTATCGGT TTCGTCGGTG AACGGTCTGG 
    CAATTGTTTG GACGGTTATT AGAAGAAGAA GAAACAGAGC AATCTTCATT 
    GTTTTTGCAG AGAACTTCAT GATTTCTTGT TGTTGAGCTT ACTTGTATTG 
    TATATATGGA TTTGTAATTT GTATGTAGCC AGTGATTGTT TTGCTTTGGT 
    GAGTTCATGT GAGTATAAGT AGAGGTGGAT TGAGTAAAAT CGATATCTTT 
    GAAGATTGAA TTAGTCAATA GTTTCACTTA TTCAATCTCT TTGTTGTTAC 
    CTAAATAGGT ATTTTTTTTT GGTTGGTCAA ACCTAAATAT TATTTCTGTG 
    ATATTTTACC TTAAAAGAAA TTTTAAAAGT TGACCAAAAC CAATAAATAA 
    TATAAACAAA TCCTAACCTT TTTTTATATA ACAAACAAAT ACTAGTATTC 
    TACTAACTTG ATACAAGTAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2335789 [Map]; Strand: c
      • AT3G07330.1 - [+] show detail - Cellulose-synthase-like C6
        Distance: 0; Region: exon5 (3UTR)
    Flanking Genome Sequence: ET13005 - 5-prime edge 
    CTAAGACTTG CCTACCCGTC TTTGTTGTGG TATTAAGCCA AACCTTGGTT 
    TTTTGTTGTG CAAAAATTGT TGTTAGGTTG TTGGTTTTTT GTTTCGGATG 
    ATGTGGCAGA AACATATTTT AAGCTTTGCT CTAATGCCAC TCTCAAATTC 
    TTTGTTGTTG TTGTTGTTTC TCTCCTAAGG GTTCATTTAT TTATATACAC 
    ACTTCTGAAT TGAAATGTAC CATTTCTTTT TTAAATCTGT TGTCTTCATC 
    TTTTAGTATT TGTTATGCTA ATTTTGGGCC TCTTCTATCT TAAGTTATAA 
    GGACCAGAAT CTGTTTGACA ATCTCTTATA TGATTTAAGG CCCAATTTCC 
    CTCAGTTCTC TTAGATCAAG CACAAATGAT TCGAGTTTTG TGATTGAATT 
    TATACGGGGA ACTTTTTTTC CATAAAAAGT CAAAACACAG ATGTTAAAAA 
    TTGTCCGACT GCAAAATGTA TAATGTACAA ACATATGACA TATGTTTCGA 
    CCTAACAAGT CTATTGCATG TATTCCTGCC TCGGAGGGCG TAAACCCAGA 
    TAAATCATTG CAGACTTGAA AGAAAATCGT TGATAAAAAA CACTGTCGAA 
    AATAACTTAT CAAACAATTT ACATTGAAGA CGATATGCTA AATTAAATAT 
    TTCCTGACAG ATATAAACCC AGACCTAATA TTAATGTACT CCAGCAGAGA 
    AAATATCTAA CAAAGTGGAA AT

AT1G14450.1

Model type
Protein coding
Short Description
NADH dehydrogenase (ubiquinone)s
Computational Description
NADH dehydrogenase (ubiquinone)s; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, respiratory chain complex I; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, B12 subunit (InterPro:IPR012576); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase (ubiquinone)s (TAIR:AT2G02510.1); Has 62 Blast hits to 62 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 53; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14455.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G07330.1

Model type
Protein coding
Short Description
Cellulose-synthase-like C6
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
Cellulose-synthase-like C6 (CSLC6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: pollen tube development; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Glycosyl transferase family 2 protein (TAIR:AT2G24630.1); Has 4986 Blast hits to 4983 proteins in 1463 species: Archae - 182; Bacteria - 3875; Metazoa - 9; Fungi - 97; Plants - 510; Viruses - 14; Other Eukaryotes - 299 (source: NCBI BLink).
Link
InterPro Scan - TAIR