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ET13022

CSHL Arabidopsis genetrap mutant lines

Original: ET13022

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13022

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26462574 [Map]; Strand: w
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: intron4 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: -11; Region: promoter
    Flanking Genome Sequence: ET13022 - 5-prime edge 
    CAACGGCTAC TTTCTTTAAA AACCCTTCAC AGCGTTTCAA TACCCCTGTT 
    TATTTATACT TTACCCAAAT TCCCAAACGC CACAATCACT TGTCTGATTC 
    TCTCATATAA TAGAGTTTTC TTTCTCTTCT CCTCTGCTTA ATTTCCCAGA 
    AATTACTCTT TCTGTGCTTA TCGGATTCAA TAGATTCTTA GTAAATCGTA 
    ATGGAGACAC CATCATCGAC AAGAAGAGTC ACGAGATCTC AGACCCGCTC 
    TGCTATCAAT AATCTCTTAT CCTCAAGTAA GTCTCCATAG GCCGATTCCC 
    TGATTTTGTT TATTGAGTCG GACTATTGTT TCTGGATCTG GATCGTTTAT 
    AATTTATCTC CTACAGAGAA AGCGGATGAT TGGTCAGAAA AATGTCAATC 
    GAAGTCGGTA CAAAAAAACG

AT5G66230.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.2

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link
InterPro Scan - TAIR