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Mutant Lines
ET13068

ET13068

CSHL Arabidopsis genetrap mutant lines

Original: ET13068

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13068

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 3; Position: 18687761 [Map]; Strand: w
- AT3G50380.1 - [+] show detail - Protein of unknown function (DUF1162)
  Distance: 0; Region: exon34 (CDS)

GTAGAGGTTT TTACCGACCG TTACCGACCG TTTTCATCCC TAGTTGCAGC 
TAAGAACAGC AGGATCCAAT GTCGTCTTTG TTGCTCTCAC TGAAATCTCC 
GATTCTGTTC TGAGGGGTGC AGAAATGAAA GGTGTTGATG GACTGGTGAG 
GACTCATCTA CTTATTATCC GGTAGGTTGA ATTTAATTAC CACTATCGTC 
TTTCTTATAA TCTCCCTCTC TTCTCTCAGG TTAGCGGTTT CCACCATGGA 
ATCCTTAAAC TGGCAATGGA ACCGTCTGTG ATAGGAACAG CTTTGATGGA 
AGGTGGCCCT GATAGAACAA TTAAGCTTGA TCGTAACCCC GGTATTGATG 
AGGTGATATT TTATGCCTTG TCTTCTACTT TCAATTTAAA TATTTTCATT 
TTTATAGAGT ATAAAAGAGA ACTGAGAAAA CTCTATGCGT AGAGCTTTTT 
CTAATGTCCA TCTACGTGTA TGCTCAAATT CACTCCTTTG CAGTTATACA 
TCGAAGGATA CCTTCAAGCT ATGTTGGATA CAATGTATAG GCAAGAGTAT 
CTCAGAGTCA AAGTCATTGA CGATCAGGTA AATAATATTT CTCGAACTTA 
GTTTTGCTTT GCCATTCCAA TAAAAGAAAA CGTAAACCGA TTCATTATGT 
TTCCAAGAGA TGATTAATAC CAACATATTT CCCCTTACTG A

5 prime edge [+] show sequence

Chromosome: 4; Position: 16631301 [Map]; Strand: w
- AT4G34900.1 - [+] show detail - xanthine dehydrogenase 2
  Distance: 0; Region: exon1 (CDS)
- AT4G34910.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: -232; Region: promoter

TGAGCTAATC CATCAAGCAA AACTCTACTA ACACCATTAA CGTACATTAT 
TGCCTCCATG AACTCGTTCT GCTCCATCTT CACTGAACCC AGACGAATAA 
CTGTTATCCA ATAATGGCAA ATATCCAATA ATGGCAAAAA TCCAATAATT 
GCAAAATCTT CTCTTTTTAA AATGTTTTTT TTTTGGTTTC ATTTTTCCAA 
AAAAAAATAG AAAACCCCAT TTTTTAACCC CTTAAAAAAA ATGGTACCCC 
AAATTAACCC CAATTTGGAA GCCTCCATCC GGGCCGGGAA CTTTAAAAAA 
CCCCAGAAAC GGCCTAACAA AGAAAACCCG GGGAAGAAGG TTTTAAAATA 
TTTTCCCCTT AATTTTTTAA TTTTTTCCCG GGGCGGTTTT TAAAACTTTT 
TCAACAAAAA AAGCCCGAAA TTTCCATTTC CCTGGGGAAA AACAAATTTA 
AACCCGGGGA AGAATGGAAC CCCGAAAGGG GGGAACAAAT TTAAAAAACC 
A

AT3G50380.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF1162)
Computational Description: INVOLVED IN: protein localization; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein (InterPro:IPR009543); Has 365 Blast hits to 355 proteins in 118 species: Archae - 0; Bacteria - 0; Metazoa - 156; Fungi - 111; Plants - 61; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G34900.1

Model type: Protein coding
Short Description: xanthine dehydrogenase 2
Computational Description: xanthine dehydrogenase 2 (XDH2); FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, allantoin biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: xanthine dehydrogenase 1 (TAIR:AT4G34890.1); Has 21587 Blast hits to 20745 proteins in 1345 species: Archae - 453; Bacteria - 12993; Metazoa - 1073; Fungi - 109; Plants - 266; Viruses - 0; Other Eukaryotes - 6693 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G34910.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 35246 Blast hits to 34671 proteins in 2939 species: Archae - 524; Bacteria - 16250; Metazoa - 5646; Fungi - 4238; Plants - 2336; Viruses - 4; Other Eukaryotes - 6248 (source: NCBI BLink).
Link: InterPro Scan - TAIR