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Mutant Lines
ET13130

ET13130

CSHL Arabidopsis genetrap mutant lines

Original: ET13130

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13130

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 793310 [Map]; Strand: w
  - AT4G01840.1 - [+] show detail - Ca2+ activated outward rectifying K+ channel 5
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: ET13130 - 3-prime edge
```
TAAAAATGAA ATCTTTTACC AAACGGAAAA CGCCTAAAGA AAAGATAAAA 
AGAGAGAGAG GAGTGTGAT
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 793420 [Map]; Strand: w
- AT4G01840.1 - [+] show detail - Ca2+ activated outward rectifying K+ channel 5
  Distance: 0; Region: exon1 (CDS)

CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTACTTGT 
GGGCTGATGA GTGGTTCCAT TTACCAACAA ATTACGAATC TCTGAATCTT 
GAAAAGCTAA TAAAAATGAA ATCTTTTACC AAACGGAAAA CGCCTAAAGA 
AAAGAAAAAA AGAGAGAGAG GAGTGTGATT GGTGTTTTGG AGTATGCAAT 
TTCGTTTTAT AGAATGGGGC ACACATACTA TGGCACGTGG GAAAATCAGA 
TTTATCGTCG GACCACATGT GTATTATTAT TGTTAGTT

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 793547 [Map]; Strand: w
  - AT4G01840.1 - [+] show detail - Ca2+ activated outward rectifying K+ channel 5
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: ET13130 - 5-prime edge
```
CCTCCGCCTC CATCACAATC CCTCGCTCTA TTTTAAACAC TTCCTTCTTC 
CATGAAATCT CCCAAGAACG TCTTCTCCTT CAT
```

AT4G01840.1

Model type: Protein coding
Short Description: Ca2+ activated outward rectifying K+ channel 5
Curator Summary: Encodes AtTPK5, a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK5 is targeted to the vacuolar membrane. May form homomeric ion channels in vivo.
Computational Description: Ca2+ activated outward rectifying K+ channel 5 (KCO5); FUNCTIONS IN: outward rectifier potassium channel activity; INVOLVED IN: potassium ion transport; LOCATED IN: plant-type vacuole membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Potassium channel, two pore-domain (InterPro:IPR003280), Ion transport 2 (InterPro:IPR013099); BEST Arabidopsis thaliana protein match is: Ca2+ activated outward rectifying K+ channel 6 (TAIR:AT4G18160.1); Has 4836 Blast hits to 4447 proteins in 1041 species: Archae - 139; Bacteria - 2196; Metazoa - 1258; Fungi - 189; Plants - 266; Viruses - 0; Other Eukaryotes - 788 (source: NCBI BLink).
Link: InterPro Scan - TAIR