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ET13163

CSHL Arabidopsis genetrap mutant lines

Original: ET13163

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13163

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 617832 [Map]; Strand: w
      • AT2G02340.1 - [+] show detail - phloem protein 2-B8
        Distance: -558; Region: promoter
      • AT2G02350.1 - [+] show detail - SKP1 interacting partner 3
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: ET13163 - 5-prime edge 
    ATTTCCATCC TACTTTCTCC CTGTGCGAAC TACGAAAAAA TGGGCAACAT 
    TTTTCGGTGT TGATCATCAA ATGATTACAA AATAGATTTG GACACCAACT 
    TTTTCCCGCT TGCTTTGTCT AACCAGAAGC TCTTACACTT TCAAAATAAG 
    AAAGAGCTAA AAGACTATCA GAGTATTTCA ATCTCTAGAA CTAAACGCTT 
    TGTTTTGGCC TCACAAACGA CAAACCGAAA ACTCCTCGAG GATTTTCGCA 
    GGACGGATTT CAATTCCTAG AATGACCAAA CCACGCTTCT GCTGGGCGTA 
    TTTACCCTCT ACAGTACTTA TCTCAACCTC ATCACTACTC ATTAATCCTC 
    CTTCATTATA GAATTCCCCA ATCTCTGTCT CCATCCACCC ATCTTCTCTC 
    AACTCTGGTT TCGCCACCAC TTTCCTCTTT CGAGCCTGCC CCTTCCCATG 
    CGTATCAAAG CATATGAAAC TTCTAAAAGA CTCCTCTCCC ACTATCCCAA 
    CTACAGCCTC TATAGACACA CCCTTAAAGC CACACCAATT ATCCGCTTTC 
    TTGAACACAA TGTAGACCGA GTAACGAGTT CTTGGAGAAA GGACACGAGT 
    ATTCATTCTG CAATTAAACT CAAACCTATA TGCTTCGCGA AGCGCCGCTA 
    CTGTTTCAAA CCTGCATATC AGTATATCAC TTGGCAACAT AATTATATGA 
    TCGGATTGAG TTGAAATAAC CCAAAGATAA TGAAAAGGAG TACATACCTA 
    GATTCTGGAC ATGGAATCCA TAGGAAACGC TG

AT2G02340.1

Model type
Protein coding
Short Description
phloem protein 2-B8
Computational Description
phloem protein 2-B8 (PP2-B8); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B7 (TAIR:AT2G02320.1); Has 560 Blast hits to 546 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 560; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02350.1

Model type
Protein coding
Short Description
SKP1 interacting partner 3
Curator Summary
encodes a protein containing an F-box domain and physically interacts with SCF subunit SKP1/ASK1. The protein also exhibits similarity in sequence to phloem protein 2 (PP2) from cucumber.
Computational Description
SKP1 interacting partner 3 (SKIP3); BEST Arabidopsis thaliana protein match is: phloem protein 2-B10 (TAIR:AT2G02360.1); Has 311 Blast hits to 302 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 311; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR