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ET13210

CSHL Arabidopsis genetrap mutant lines

Original: ET13210

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13210

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 21693401 [Map]; Strand: w
      • AT1G58390.1 - [+] show detail - Disease resistance protein (CC-NBS-LRR class) family
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13210 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCGA 
    CTCCGACTTG GAGGTAAATG TTAAGAAACT GGTTGGATAT TTGGTGGATG 
    AAGAAAACGT TCAAGTGGTT TCCATAACCG GGATGGGTGG TCTAGGTAAA 
    ACCACACTTG CTAGACAGGT TTTTAACCAT GAGGATGTTA AACATCAGTT 
    TGATAGACTC GCATGGGTGT GTGTCTCACA AGAGTTTACC CAAAAATCTG 
    TGTGGCAAAC GATCTTGCAG AATCTCACAT CTAAAGAAAA GAAAGATGAA 
    ATCTTAAAGA TGAAAGAAGC TGAACTCCAT GAAGAACTTT TTCAATTGTT 
    GGAAACATCG AAAACATTAA TTGTCTTTGA TGACATATGG AAAGAAGAAG 
    ATTGGGACCT AATAAAGCCA ATTTTTCCAC CCAAAAAAGG TTGGAAACAA 
    CTCTTCTTGA TTACGTTTTT TGTGTTTAGT TATTTTGAAA CAACTAAGTT 
    TTTACTACAG GTTGGAAGGT GCTTCTTACT TCTCGAAATG AGAGTGTCGC 
    AGTACTTGGG G

AT1G58390.1

Model type
Protein coding
Short Description
Disease resistance protein (CC-NBS-LRR class) family
Computational Description
Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, LP.08 eight leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 14341 Blast hits to 13745 proteins in 491 species: Archae - 4; Bacteria - 531; Metazoa - 280; Fungi - 132; Plants - 13314; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
Link
InterPro Scan - TAIR