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ET13211

CSHL Arabidopsis genetrap mutant lines

Original: ET13211

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13211

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19608368 [Map]; Strand: w
      • AT2G47890.1 - [+] show detail - B-box type zinc finger protein with CCT domain
        Distance: 0; Region: exon1 (CDS)
      • AT2G47890.2 - [+] show detail - B-box type zinc finger protein with CCT domain
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13211 - 3-prime edge
    CGGTAGAGGT TTTTACCGAC CGTTACCGAC CGTTTTCATC CCAGGTTGGC 
    GACGTGGACT TGCTTGTCGC AGGCGAGGCA GAGCTTGGCG GAGTCAGCTT
    TGCAGTAGAC AAGAGCCACG GAGGAGTCGC AATAGTCGCA GAGGCGGTCA
    CGCTGATGAC CTTCTTCTGC TTCCATGGGA GGAGCTTAGA GGAGACGACG
    CCGACAGTTT TGGTAAGAAG AAGAAGTTGA TCTTTTCTTG GGATATTTTG
    GGGCAACAAA ACCAAATTTG GTGGCTTATG TAAAAGCCAT ATCTTAATTG
    CATTCTAGGT ACTGAATGAC GTTAAAGTGA CGACATATTT GCTTAGACAA
    AGTCAAATAC ATTTTATTTC TTGGGGAAGA AGCTGGAAAC CTACACTCTC
    TTCACCTTCC CGTGCCTTTC TT

AT2G47890.1

Model type
Protein coding
Short Description
B-box type zinc finger protein with CCT domain
Computational Description
B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: stem, inflorescence meristem, root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G28050.1); Has 3246 Blast hits to 2264 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3153; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G47890.2

Model type
Protein coding
Short Description
B-box type zinc finger protein with CCT domain
Computational Description
B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: stem, inflorescence meristem, root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G28050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR