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ET13227

CSHL Arabidopsis genetrap mutant lines

Original: ET13227

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13227

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1531697 [Map]; Strand: w
      • AT4G03450.1 - [+] show detail - Ankyrin repeat family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13227 - 3-prime edge 
    CCGACCGTTA CCGTTCGTTT TCATCCCTAC GCCCGCTACG GGTTACACCG 
    AAAATGTGCC AGAGTTCTTT ACCAATATCA GATTCTCTGA TCTGTTTGAC 
    CTCGCCAGTG AATATGTGCC TATGAGTCCT GAGATTGTTA GCGCAGTAAG 
    CGCGGGGGAG AAAGAATGGC TGGAGGTATT GAGAAGTTAC GGTAAGCCAA 
    TGGAATGTCT AAAGAGCGAT GGAGGATATT CTGTTCTTCA CCTTGCTGCT 
    GTTTGGGGTC GAGTTGAAAC AGTGAAGAGG ATAGTCTCTG AATGCCCATG 
    TCTTCTTCTG GAGAAAGACT CGAGGGACCA GCTTCCCCTT CACGTGGCGG 
    CCCATGCCGG TCATATAGCT GTTGTTGAGG CTCTTGTTGC GACATTAACA 
    TTTGTCTCAG CTACACTTTC TGAAGAAGAG AAGGAGAGAG TGAATGTATA 
    TGTTAGCAAG AACATAGATG GAGATACTCC TCTGCACTTG GCCTTGAAAG 
    GCGACAATGT GAAGACAGCT ACTTTTCTGG TGAACACAGA CCAACGGGCT 
    TC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2580005 [Map]; Strand: c
      • AT4G05040.2 - [+] show detail - ankyrin repeat family protein
        Distance: 0; Region: exon3 (CDS)
      • AT4G05040.3 - [+] show detail - ankyrin repeat family protein
        Distance: 0; Region: exon3 (CDS)
      • AT4G05040.4 - [+] show detail - ankyrin repeat family protein
        Distance: 0; Region: exon4 (CDS)
      • AT4G05040.5 - [+] show detail - ankyrin repeat family protein
        Distance: 0; Region: exon4 (CDS)
      • AT4G05040.1 - [+] show detail - ankyrin repeat family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET13227 - 5-prime edge 
    CCTACTTTCT CCCTGAGCGG GCGTAGCTGC TTCTCCTTCC ACTTGAAGGA 
    AACCTAGTGC ACGGAATACG CGTACGATTC CGCGCTCTAT TAGATTAATG 
    GGGGCGTAAC TTTGTTTCGA TTGGTCATGA TACACACCCG TTGACCTCTG 
    TGCCTCAATC CTATCAAGAC CTGCTTCAGA ACTGTCCATC CTCAATCCTG 
    AAATCATCAG ACAAACACAG TTTTAAGTTC CCTAACCAAA TGTCAACGAT 
    ACCAAGAAGA GGAAGGAGAG ACTTACGAAA TGTAAAGGAG ATCAGAAGTA 
    CAAGAGGAGT TCCTGAAGTC TGATGGAAGA GAGAGACTAT ATTTTCGTCC 
    ATTTATAAAA CTCCATCTGT GTCTCAAAGC TCAGAGTAAG TTTAATCAAA 
    GTCAATGCAG AAACAGAGGT ATGGTCATTT TTTAATCCGA AATAAACCTA 
    ACACCTCGAT TACAGAGTTG TAGTCTTTAC TCTTTCGAGT GATTGGGGTA 
    ATCTAAAGTC AACTTTATAA AATAAAATAA AAAAAACTAC GTAAATTTAC 
    ATACCCCAAT ATAATGCATT TGAAAAGCTT AGTTTTGATA GTTCTACCCA 
    TGGGCTGAAT TATACAAACA CATGCAGATC AGGCCTA

AT4G03450.1

Model type
Protein coding
Short Description
Ankyrin repeat family protein
Computational Description
Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G03440.1); Has 22492 Blast hits to 11630 proteins in 488 species: Archae - 24; Bacteria - 1675; Metazoa - 12211; Fungi - 1719; Plants - 2554; Viruses - 43; Other Eukaryotes - 4266 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G05040.1

Model type
Protein coding
Short Description
ankyrin repeat family protein
Computational Description
ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G14390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G05040.2

Model type
Protein coding
Short Description
ankyrin repeat family protein
Computational Description
ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G14390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G05040.3

Model type
Protein coding
Short Description
ankyrin repeat family protein
Computational Description
ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G14390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G05040.4

Model type
Protein coding
Short Description
ankyrin repeat family protein
Computational Description
ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G14390.1).
Link
InterPro Scan - TAIR

AT4G05040.5

Model type
Protein coding
Short Description
ankyrin repeat family protein
Computational Description
ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G14390.1).
Link
InterPro Scan - TAIR