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ET13252

CSHL Arabidopsis genetrap mutant lines

Original: ET13252

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13252

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 332850 [Map]; Strand: c
      • AT3G02000.1 - [+] show detail - Thioredoxin superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13252 - 5-prime edge
    TCCTACTTTA TCCCTGATCG TGGGGATCAT ACAAGATGAG CAGCTTAGGA 
    TTCGGCGGTT TGGGGATGGT GGCTGACACT GGTCTGCTTC GTATAGAGTC
    CCTGGCTTCT GAGAGCGCGG TGGTGATCTT CAGCGTGAGC ACGTGCTGCA
    TGTGCCACGC CGTGAAGGGT CTCTTCAGAG GAATGGGCGT CAGCCCCGCC
    GTCCACGAGC TCGACCTCCA CCCCTACGGC GGCGACATCC AGCGAGCCCT
    CATTCTCNTT CACCTCGACG ATCCGGCTCC TCTTCTCCAG GGTCTCTCCC
    GGTCGTCTTC ATCGGCGGTA AACTGGTTGG AGCTATGGAC AGAGTCATGG
    CTTCTCACAT AAACGGCTCT CTCGTTCCTC TTCTCAAAGA CGCCGGCGCT
    CTCTGGCTCT GATCCCTTCC TCTGCTTTCT TTTTTCTTTT CTATTTGAAG
    TTTTCTTGTA AGAGAATGTG GTGGAGGAAG ATTAGGAAAC TAGTCAATGG
    CTGTAATGAC AGGTTTTAGA TTATAGTTTG TAATTAGAGA GAGAGTTGTT
    TTAAGCTCAC CTTTCTCTGT CTTCCTCT

AT3G02000.1

Model type
Protein coding
Short Description
Thioredoxin superfamily protein
Curator Summary
Roxy1 encodes a glutaredoxin belonging to a subgroup specific to higher plants. It is required for proper petal initiation and organogenesis. It is likely to function in the temporal and spatial expression regulation of AGAMOUS in the first and second whorl. It's function is dependent on the Cysteine 49 residue and its nuclear localization. ROXY1 interacts in vitro and in vivo with members of the TGA family of transcription factors (e.g. TGA2, TGA3, TGA7 and PAN).
Computational Description
ROXY1; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT5G14070.1); Has 1149 Blast hits to 1147 proteins in 188 species: Archae - 0; Bacteria - 38; Metazoa - 213; Fungi - 109; Plants - 748; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).
Link
InterPro Scan - TAIR