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ET13261

CSHL Arabidopsis genetrap mutant lines

Original: ET13261

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13261

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16200050 [Map]; Strand: c
      • AT3G44630.2 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: 0; Region: exon6 (CDS)
      • AT3G44630.3 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: 0; Region: exon6 (CDS)
      • AT3G44630.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: ET13261 - 5-prime edge 
    CTTTATCCGA GTGCTTGGTG TAATAGAACT TTGAGATCAT TCTGTTTGAC 
    CCTGATGGCA ATGACTACAC TCGGCCACAT ATCATCATCT CTCATTTCTT 
    CATTAACCTA AACAAGCATG ATACAAGCCT TAAATCTCAA GGTTGTAGGA 
    AGAGACCACT CCTTCAACTT GATTTTCAAG GAATCCCCAG AAGTAGCTCG 
    GTGATTGAAG CAGGCAGGCA CTTGTGTACC AGGTAACATC GCACATCGCA 
    CAGTTGATGT GTGCATGATG AGATCTCTGG CTTCTTGATT CAGTTTGAAG 
    CATTTGGGGA AATAGAGACG GATCTCTGGA TTGTTAAAGC AACAATCCAG 
    TCTCTCGAGG GACTTACAAT TATCTGCATA TATGTAATCA AGGGAATCTG 
    AAAGTTGGGG GAGTGATACC AGATTATTGC AGTTGTTGAG TCTAAGAACA 
    CGTAAACGAG ACATTCTCTT GACCCATGGA

AT3G44630.1

Model type
Protein coding
Short Description
Disease resistance protein (TIR-NBS-LRR class) family
Computational Description
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT3G44480.1); Has 41227 Blast hits to 23573 proteins in 843 species: Archae - 26; Bacteria - 2454; Metazoa - 3797; Fungi - 287; Plants - 32967; Viruses - 4; Other Eukaryotes - 1692 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G44630.2

Model type
Protein coding
Short Description
Disease resistance protein (TIR-NBS-LRR class) family
Computational Description
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT3G44480.1); Has 41227 Blast hits to 23573 proteins in 843 species: Archae - 26; Bacteria - 2454; Metazoa - 3797; Fungi - 287; Plants - 32967; Viruses - 4; Other Eukaryotes - 1692 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G44630.3

Model type
Protein coding
Short Description
Disease resistance protein (TIR-NBS-LRR class) family
Computational Description
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT3G44480.1); Has 41236 Blast hits to 23630 proteins in 841 species: Archae - 26; Bacteria - 2523; Metazoa - 3794; Fungi - 289; Plants - 32905; Viruses - 4; Other Eukaryotes - 1695 (source: NCBI BLink).
Link
InterPro Scan - TAIR