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ET13285

CSHL Arabidopsis genetrap mutant lines

Original: ET13285

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13285

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29567377 [Map]; Strand: c
      • AT1G78600.2 - [+] show detail - light-regulated zinc finger protein 1
        Distance: 0; Region: exon1 (CDS)
      • AT1G78600.1 - [+] show detail - light-regulated zinc finger protein 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13285 - 3-prime edge 
    CCGTTTTCAT CCCTACCTTT CTGGATGAGT TTGAGATAAG AGAAGATGAA 
    GATTCAGTGT AACGTTTGTG AGGCGGCGGA AGCGACGGTT CTATGTTGCG 
    CCGACGAGGC TGCTCTTTGT TGGGCTTGCG ATGAGAAAAT TCACGCCGCT 
    AATAAACTCG CCGGAAAACA TCAGAGAGTC CCTCTCTCTG CCTCTGCCTC 
    TTCCATACCC AAATGTGACA TTTGTCAGGT CTCATCATCT CTTTGACTTT 
    TTCTCTCGAT TTACAAAATC TTTGATCTGA TTTCAGATTA CCCTTGACTG 
    AAATTCTCAA TATTTAGAGA AAAGTTTGAA TCTTTTTAGG ATTAGAGAGG 
    CCATAAACCA GTTTTTTTAG TTCTGATTCT GTTAGTGTGT TTTTTCTCAA 
    ATTTGGGATT TTTGTGTGTA CAGGAAGCAT CTGGATTCTT CTTTTGTCTG 
    CAAGATAGAG CTTTGCTATG TAGGAAATGT GATGTTGCAA TCCACACTGT 
    GAATCCTCAT GTTTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29567198 [Map]; Strand: c
      • AT1G78600.2 - [+] show detail - light-regulated zinc finger protein 1
        Distance: 0; Region: exon1 (5UTR)
      • AT1G78600.1 - [+] show detail - light-regulated zinc finger protein 1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET13285 - 5-prime edge 
    TAAAATTTTG AGCTTGAGGC TTATGGTTTA AGCCACTCAT ACGTTTTCTC 
    TTTGGATTTT TTGTTGTTGT TGTCAACTTC TTTGATTTTT ATTTGTCATC 
    GGAAAATGTG ATTATTTAT

AT1G78600.1

Model type
Protein coding
Short Description
light-regulated zinc finger protein 1
Computational Description
light-regulated zinc finger protein 1 (LZF1); CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT1G06040.1); Has 1826 Blast hits to 1364 proteins in 120 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 0; Plants - 1701; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G78600.2

Model type
Protein coding
Short Description
light-regulated zinc finger protein 1
Computational Description
light-regulated zinc finger protein 1 (LZF1); CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT1G06040.1).
Link
InterPro Scan - TAIR