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ET13302

CSHL Arabidopsis genetrap mutant lines

Original: ET13302

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13302

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: ET13302 - 5-prime edge 
    AAGGGGAACA CATATTAAAG CCAAAAAACC CTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 10774713 [Map]; Strand: w
      • AT5G28715.1 - [+] show detail - transposable element gene
        Distance: 4236; Region: intergenic
      • AT5G28720.1 - [+] show detail - unknown protein; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bac...
        Distance: -1418; Region: intergenic
    Flanking Genome Sequence: ET13302 - 5-prime edge 
    ATTCGGTTTA AAGGGGAACA CATATAAAAG CCAAAAAACC CTT

AT5G28715.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 0. P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)
Link
InterPro Scan - TAIR

AT5G28720.1

Model type
Protein coding
Computational Description
unknown protein; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR