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ET13307

CSHL Arabidopsis genetrap mutant lines

Original: ET13307

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13307

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4438327 [Map]; Strand: c
      • AT5G13750.1 - [+] show detail - zinc induced facilitator-like 1
        Distance: 0; Region: exon1 (CDS)
      • AT5G13750.3 - [+] show detail - zinc induced facilitator-like 1
        Distance: 0; Region: exon1 (CDS)
      • AT5G13750.2 - [+] show detail - zinc induced facilitator-like 1
        Distance: -334; Region: promoter
    Flanking Genome Sequence: ET13307 - 5-prime edge 
    CCTACTTTCT CCCTGCTTGC AGCCAGAACA ATCCTCATGG AAGTTCTTCT 
    CTAGCAAACA CTCGGCATAC TCTTCCGCCA TTTTCCACAC ACCTCTCTAA 
    TCAAATCAAA ATTTTGGGGG CGATATGATG TGTGTTTTAA TGAGGGCAAT 
    GAAAGAAGAA TGAGAAGATG CGATATATGG TTTTCACGTA CTCTCTTCCA 
    AAAAAGACGG GAAAACAATT GAATTATTTA ACTGCTGCGA GACAGAGAAG 
    AAGGAAAAAA ACAACTTTGT CTTTTGCCCT CACAAGTCGC TTATGACATG 
    TCACCTCTTA CTAATCACAT TTGCATTTAT TGTTTTT

AT5G13750.1

Model type
Protein coding
Short Description
zinc induced facilitator-like 1
Computational Description
zinc induced facilitator-like 1 (ZIFL1); FUNCTIONS IN: tetracycline:hydrogen antiporter activity; INVOLVED IN: response to karrikin; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Tetracycline resistance protein, TetA (InterPro:IPR001958), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: zinc induced facilitator 1 (TAIR:AT5G13740.1); Has 19294 Blast hits to 18859 proteins in 2587 species: Archae - 361; Bacteria - 14367; Metazoa - 620; Fungi - 2172; Plants - 389; Viruses - 0; Other Eukaryotes - 1385 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G13750.2

Model type
Protein coding
Short Description
zinc induced facilitator-like 1
Computational Description
zinc induced facilitator-like 1 (ZIFL1); FUNCTIONS IN: tetracycline:hydrogen antiporter activity; INVOLVED IN: response to karrikin; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Tetracycline resistance protein, TetA (InterPro:IPR001958), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: zinc induced facilitator 1 (TAIR:AT5G13740.1); Has 14029 Blast hits to 13852 proteins in 2396 species: Archae - 230; Bacteria - 10365; Metazoa - 433; Fungi - 1573; Plants - 330; Viruses - 0; Other Eukaryotes - 1098 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G13750.3

Model type
Protein coding
Short Description
zinc induced facilitator-like 1
Computational Description
zinc induced facilitator-like 1 (ZIFL1); FUNCTIONS IN: tetracycline:hydrogen antiporter activity; INVOLVED IN: response to karrikin; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Tetracycline resistance protein, TetA (InterPro:IPR001958), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: zinc induced facilitator 1 (TAIR:AT5G13740.1); Has 18147 Blast hits to 17729 proteins in 2581 species: Archae - 337; Bacteria - 13496; Metazoa - 505; Fungi - 2137; Plants - 360; Viruses - 0; Other Eukaryotes - 1312 (source: NCBI BLink).
Link
InterPro Scan - TAIR