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ET13319

CSHL Arabidopsis genetrap mutant lines

Original: ET13319

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13319

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 421469 [Map]; Strand: c
      • AT4G00970.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 41
        Distance: 0; Region: exon7 (CDS)
      • AT4G00975.1 - [+] show detail - other RNA
        Distance: -504; Region: promoter
    Flanking Genome Sequence: ET13319 - 5-prime edge 
    ACAACAGAAG CCATTGTTGG TCTACTCTCT GCATTATCCT GAACACACAA 
    CAAACCAATG TGAATGCATT TCATGATTTC ATCACTGACA CCTATTGTTT 
    CAACGAAACT TGGATCCACA ATGTTTAACA CTTCCCCTTC TCTCCAGCTC 
    TTCCATACCT ATACGTATAA AAGACAATAT ATGACTTTAA ATGAAGACAA 
    TAAATGAGTC CTCAATTACA ACCCCAAACT CAAAGTCTAG AGTCAAAAAA 
    ACAAAACAAG AGTTTTATTC ACTTACATAG CTAAGGAGGA ATAATGAGCT 
    GTCTTCTTCT GGAGACCAGT TGTTTTTCTT ACCTTTAATA ATCTCCAGGA 
    CTAGTACACC GAAGCTAAAT ACATCGGTTT TTACCGAGAA TTCGCCACTC 
    ATTGCATACT CGGGAGCCAT GTAACCGCTG TAACAACCAA ATAAGTTTCG 
    GTTTTCATTT TTGTTTTACA GAACTGATAA TAACTTAAAG GGTAGTTTTT 
    AAAATGGTAG CTTACTAGGT TCCTGCAACT TTACTTGTAA ACCTGGTCTG 
    ACTTGTTTGG TCAGTATCAA ACAACTTTGC CATTCCAAAA TCCGCTATTT 
    TCGGATTCAT TGCATCGTCC AATAGAACAT TGCTGGCTTT CATATCTCTA 
    TG

AT4G00970.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 41
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 41 (CRK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 29 (TAIR:AT4G21410.1); Has 118247 Blast hits to 116820 proteins in 4488 species: Archae - 94; Bacteria - 12773; Metazoa - 43795; Fungi - 10171; Plants - 33437; Viruses - 407; Other Eukaryotes - 17570 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00975.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT4G00980
Link
InterPro Scan - TAIR