ET1332

CSHL Arabidopsis genetrap mutant lines

Original: ET1332

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET1332

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 10856795 [Map]; Strand: c
      • AT5G28830.1 - [+] show detail - calcium-binding EF hand family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET1332 - 3-prime edge 
    CCGTTTTCAT CCCTATGTAA CTTTACCTCT CTCAGATTTT TTTCTCTCAA 
    TCTCTCCAAT GTCGAACACG GCGGGATTAA CGATTTTCGA CGGTGATCTA 
    CTTAGATCCA TCGATCTGCC C

AT5G28830.1

Model type
Protein coding
Short Description
calcium-binding EF hand family protein
Computational Description
calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G38810.2); Has 259 Blast hits to 210 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link
InterPro Scan - TAIR