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ET13340

CSHL Arabidopsis genetrap mutant lines

Original: ET13340

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13340

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 252216 [Map]; Strand: c
      • AT3G01680.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR02164...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13340 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT GTCCAAGTGC 
    GTGGCCTTCT CTCTCTCGTT GAAGATATTC TCGATCGTGC CACTCTTGAC 
    TCTGAAGACA CCAACGCCTC CGTTAGTATT CCTACACACA ATCAATTTCG 
    TTCTTAGTAC GTACGTATGA TCATGTTCCT TTACGTACTT GCTTTGATTT 
    TTCAGATGCT TCCGTTGCCC ACTGAGGATA AACTGATGCA GTCAAGCATG 
    ATGAGCGTTC TTGATAGTGT CTCCTATGCT ATCGATCGTG TTGCCTGCGA 
    GGTATAGCTA CATTCACTTT TTGTTTGCCA CAATTCAAGT GATTCTTTGT 
    TTAGACTTTT TTGGCTCACC AAAATAACAT CCAAGTTATT AGGTTTCGTT 
    CGGGCTAAAT TCGGTGTGTT TTGGTTCAGT TTCAGGATAT TCAGTCTAAA 
    TATAAATATG TTGACCATCT TGGTTCGGTT AGGTTGCGCA GTTTCCACCT 
    ACCCCTAGAT ATCAATCTTT GTGGTTATAG ATGCTCTTAT AAACCACACT 
    CTCTAAAGAT TGTTGTACAC GTAACCAGCA ATAACTTGTT ACAGAAGCAA 
    TACACTGTTT A

AT3G01680.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR