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ET13353

CSHL Arabidopsis genetrap mutant lines

Original: ET13353

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13353

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28380490 [Map]; Strand: w
      • AT1G75580.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: 2312; Region: intergenic
      • AT1G75590.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: 2406; Region: intergenic
    Flanking Genome Sequence: ET13353 - 3-prime edge 
    GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA TATGTAGCAC 
    TTTCGGACTT GGTGGGATTG TGATCTCTTT ACCGACCCAT TCTCATTCAA 
    TATTAGGCAT TACCATATCC TTTTCTTTAG TCTTTCTACG TTCACAAGGA 
    CTACATCCAG GGAAAAAGAA ATATCTTTAT TTATTAAAGT GGGTGACCAT 
    CAGAAAAGGG AGCATAATTA TAGCAAAATT TCCGAAAGAA TGTATACACA 
    TCTTCAACAA TTAATCCGTA CTAAACCTTT TACCAAACAA AACAATTAAT 
    CCGTACGGTA ATAAATAGAC CAAAGAAAAC GATATATTAT CACATACTAT 
    CACTTTGCGT ATAACGCGGA ATAATATTTA ATTGGTTACT TATACGAAAA 
    TAACTCAAAA GAAAGCATTG CATAAGACAT TAACAACCAT GACGTCTCCA 
    TGTGTAGCTG AACTTGAAAA ATCATCGTAG TCCTCCACCA CTGATATGCA 
    TGATAGATAA TGAAAATTTC ATC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28380550 [Map]; Strand: w
      • AT1G75580.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: 2372; Region: intergenic
      • AT1G75590.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: 2346; Region: intergenic
    Flanking Genome Sequence: ET13353 - 5-prime edge 
    TCCTACTTTC TCCCAGCCTA CATATCCACT AATTAGCATA TCATACACAA 
    TTTTAAAAGA AAGAAAAAGA ACGAACAAGA TTTATCACTT GTTATTTTAA 
    CATCATTACG ACTACGACGA ATCATATTTT GGATTCTTTT CCTTCTTTCT 
    ATAGAAGTCG TTTTGGTGCG AAATTAGTTA CAACTACATC AACTGTAAAT 
    TTGACTCGAT GTAATATCTA CTTTACTTTA TGGCAAAATC AGATATAATA 
    TCAGGCGATG GTTTTAATTT TTAAAGCAAT TATTATTGGC GAAGAATTTA 
    TACATGCATA AGTATAAACC TTATTTTTCA TTATAATTGA TTTTTAACCT 
    GTTTTATAGT TGACTCATTG ACTAATTTAC AGGAAAGGGA TTAAAGCATT 
    TGAATGGGCC TCTTTAAGGG CCACCACACC AACCATCATG AATCTTGGGT 
    CTCGATCTGT TAAATGGCTC GTTATGATTG GTTAATGGTT AAGCCCGAGT 
    GGATGGGTTT TTCCACAATG GACTTGGGCC GTAACATTCC AGTATACAAC 
    AAAATTAATA GATGGTTATT TCTTAAATAC AAAAAGAAAA ATATTTTACG 
    GTATGCGTCT GAGAAATCCC CTGAGAAAAC CAGAATCAGA ATGAACCAAG 
    AGGCAAGAGC CTAACCTATC GAACATGAA

AT1G75580.1

Model type
Protein coding
Short Description
SAUR-like auxin-responsive protein family
Computational Description
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G19830.1); Has 1403 Blast hits to 1386 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1402; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G75590.1

Model type
Protein coding
Short Description
SAUR-like auxin-responsive protein family
Computational Description
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G10990.1); Has 1416 Blast hits to 1399 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1415; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR