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ET13388

CSHL Arabidopsis genetrap mutant lines

Original: ET13388

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13388

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 10356233 [Map]; Strand: w
      • AT4G18900.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: -232; Region: promoter
    Flanking Genome Sequence: ET13388 - 3-prime edge 
    AAGATTACAA TAACCAAATA AACACACACA CACACACACA AAGAAAAGCA 
    TAACAAACAA AAAGGGTCAA ATAATAATTA TACCAATTTT CAAAATCCAA 
    GGTCGAGAAT CGAGAGGTTC AACAACAAAG ATAACATAAT GATAGAAGAA 
    TCGGGTAAAA CACATTCCTT ACTAAAGAAA ATAATTAACC TGATTAACTC 
    TTTACGATGA TGACAACTTA CGTTACAAAT ACAAACGAGG CTTACACTTA 
    ACCCTTGCTC GGAGGTATCT ATCCAAATTA GCGAGAGAGA GCGAGGGCTC 
    TGTTTACATA CTCTTAAATA AATTCATTCA AAAATAAATC ATATAAAAAA 
    ATTATGTATA TATGGGCCTC ATTTTTAGCC AAATAAGAAC AATTGGACAT 
    CTAAATCGGA CCCACTATAT AATTTGTTGA CTTGTAAAAA AGCCCA

AT4G18900.1

Model type
Protein coding
Short Description
Transducin/WD40 repeat-like superfamily protein
Computational Description
Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G18905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR