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ET13397

CSHL Arabidopsis genetrap mutant lines

Original: ET13397

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13397

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 19086550 [Map]; Strand: c
      • AT3G51430.2 - [+] show detail - Calcium-dependent phosphotriesterase superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G51430.1 - [+] show detail - Calcium-dependent phosphotriesterase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13397 - 5-prime edge 
    CTACTTTCTC TAGAGACGAG TAAGGGGACG ATGGTGAAGA AGAAGAGAAA 
    ACGAGAGGAG TAGAACATAG GCATTGGATA CAAGAGAATT GGCTTTGTGG 
    AAAAATGGTG AGCAGACAAA ATTTGGAGTG ATTGTTGTTG ATGATCAAAT 
    CGCAGATCAA ATCGCAGATC AAATCGCTGT TGAGTGTTGA CTCGTATAAA 
    TTTGGTCTTC TTTGTTCCGT AGTGCGCTAA ATTACGTAAC CAACAACAAC 
    TCTCGCTAGT CGAATCTCGT GGGCTTTAAT TATATTCCCA ATAGGCCCAA 
    TTATGTTTTC TGGAGTTGAA AACAGAGTAA TATTCACTGT ACACGACTTT 
    ACATTTTTTT TTTGGGGAAA AAAAGAAAGT TTTAACCCTT TTTTTTTTTG 
    GACAAAAAAA ATTGGAGGGG GAGAAAGCCT TCCCCCAAAA ATTTAAAAAC 
    CACCCCTTTA CCCCTAAGTA CAATGGACCC CGGCGGAGGG ACCAAAACCA 
    GGTTGGGGGG AAA

AT3G51430.1

Model type
Protein coding
Short Description
Calcium-dependent phosphotriesterase superfamily protein
Curator Summary
Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.
Computational Description
YELLOW-LEAF-SPECIFIC GENE 2 (YLS2); FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: response to ethylene stimulus, leaf senescence, alkaloid biosynthetic process, response to abscisic acid stimulus; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G51440.1); Has 1475 Blast hits to 1462 proteins in 362 species: Archae - 36; Bacteria - 561; Metazoa - 225; Fungi - 12; Plants - 456; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G51430.2

Model type
Protein coding
Short Description
Calcium-dependent phosphotriesterase superfamily protein
Curator Summary
Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.
Computational Description
YELLOW-LEAF-SPECIFIC GENE 2 (YLS2); CONTAINS InterPro DOMAIN/s: Strictosidine synthase (InterPro:IPR004141), Strictosidine synthase, conserved region (InterPro:IPR018119), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G51440.1).
Link
InterPro Scan - TAIR