Home
Mutant Lines
ET13414

ET13414

CSHL Arabidopsis genetrap mutant lines

Original: ET13414

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13414

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 4; Position: 17495605 [Map]; Strand: c
- AT4G37160.1 - [+] show detail - SKU5 similar 15
  Distance: 0; Region: exon6 (CDS)

AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTACT 
TGCAGCATTT GCCGTCAAAT TCATCCTAAG AATCAGAAAA AGTTAAAGTC 
AAATTAAGCA GAACCAATCT AGACTTGTAC GGTTCGATTT AGTTCGGTTA 
TGTTCGGTTT GGTATTAATA CCTAATGGTT CTTGCTTGTT TCATGGACCA 
ATGGATATGG TAAGTAGGAC CAATGGGGAG AGGCCCATAT GCAGCGTTTT 
TGGAGCCTTG GTAACGGAGA CTCGCGGTTG TGGTTAGTAC CGGTTTTGTA 
AACCGGGTTG AGGCCACGAT GAAATAGTCC CTCACAGAAG CTTTTAAAGT 
GACCAGGACG GTCATGGACT GACCAACGTG GACGTCAAGC GACTCATAAC 
TCTCCTGAAG AGTGTGAGCG CCTTCTACTT CAATGAGGCT CATTGTGTGA 
TTTTGAATCC TAAAATTTAT CGATGTAGCT ATACCGACAT TGGATACCCG 
GAACTTGTAT GTTTTACCTG AAGATAGACA ATGAAATTAA AGACATATCA 
AAGACTAGAA CAAGACCATG CACGATGTAA TATTAAAGAT TTGTTATGAT 
GACATTACCT TGTTGACCGG TAAAGATTAA ACCTTTAGAG ACTCCATTGA 
TGAGAAGAGC ATCAGGAAGA GGAAGAGCAG AGCCTGCGTC GAGCGATTTT 
CGCAAGTCCT AGAGATCACA AGAATAGTTA AAGAAAAACA TTTGAAAACA 
TATAAACCAA ATCCTTACTT TTTTAAAACA TCAAATTTGC

5 prime edge [+] show sequence

Chromosome: 2; Position: 587325 [Map]; Strand: c
- AT2G02220.1 - [+] show detail - phytosulfokin receptor 1
  Distance: -201; Region: promoter

CTACTTTATC CCTGACTCTT CACTTTCTAT CTCTCTCTAG AATTTTGCTT 
GCATTAAAAC AATACCCACT ACTTGCTGTT GCGTGTTGAA GTCAAAAGTC 
GCCATTTTTC TCTCTCTTGC TTCTTCATCT TCATTGATCA TCATCTAAAA 
TGGCAATAAT CAGAAAACCC ATTTCGTATA CTCTCAGATT TCTCAAGGGT 
TTTTGTTGAA TCTTAATTCT TCTTCTCAAA GTTTCTTCCT TTATATTCTT 
CTTCTTCTTC CTCTGTTCTT GAAATGCGTG TTCATCGTTT CTGTGTGATC 
GTCATCTTCC TCACAGAGTT ACTATGTTTC TTCTATTCCT CGGAATCTCA 
GACCACCTCC ACGTGCCATC CACATGACCT CGAAGCCTTA CGTG

AT2G02220.1

Model type: Protein coding
Short Description: phytosulfokin receptor 1
Curator Summary: Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ).
Computational Description: phytosulfokin receptor 1 (PSKR1); FUNCTIONS IN: peptide receptor activity, protein serine/threonine kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, response to wounding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phytosylfokine-alpha receptor 2 (TAIR:AT5G53890.1); Has 188205 Blast hits to 128830 proteins in 4018 species: Archae - 120; Bacteria - 18455; Metazoa - 56562; Fungi - 9680; Plants - 79633; Viruses - 405; Other Eukaryotes - 23350 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G37160.1

Model type: Protein coding
Short Description: SKU5 similar 15
Computational Description: SKU5 similar 15 (sks15); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 16 (TAIR:AT2G23630.1); Has 5537 Blast hits to 5515 proteins in 1034 species: Archae - 14; Bacteria - 1701; Metazoa - 277; Fungi - 2124; Plants - 1252; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink).
Link: InterPro Scan - TAIR