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ET13475

CSHL Arabidopsis genetrap mutant lines

Original: ET13475

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13475

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1530382 [Map]; Strand: c
      • AT4G03450.1 - [+] show detail - Ankyrin repeat family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13475 - 3-prime edge 
    TATATTGTAT CAAAAACAAA ATAACGTACA GACAGATATA CCTCTCGAAA 
    GACGTAATTG GACTGCACAT TCGACTCCGC TATATCCAGA GCACTCAAGC 
    CATCTTTGTT ACGTATATGT AGGTGGTTTC CCAAAGTGAA CCCATTAAGT 
    ATATTAACAG TTCGAGGACG CCACGTTAAG GTGGCTAAGT GCAGAGGTGT 
    ATTCCCATCC ACATCTTGCT CCATAATCAG ATCATTCTTT ATCACATCAT 
    AAGCCTTGAT GACTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3375360 [Map]; Strand: w
      • AT3G10780.1 - [+] show detail - emp24/gp25L/p24 family/GOLD family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13475 - 5-prime edge 
    TCCTACTTTC TCCCGACTTG TCCTTGATTA CATTTGCATC GACGATGCTT 
    TCACTCAACT TGGTCCAACA TTAGATGTTC GGGTTTGTAC ATCAACCATA 
    TATACTCCAT TTTTTCTTCG TAAATTTCAT GCATCCGGGA AAATTTCGTT 
    ACTGTGTGGT CAAACGTTAT ATATTTGAGA TAGAAATAAT TTGACTACGA 
    GTTAAGATCA CTCAAATTAG AGATCGAAAA TCAACATTAA ACTGCTGATA 
    GATTTGTATA GGAAAAATCA ATTAGTTAAC CACAAAATTC ACATGAACTT 
    TTCTACCAAG AGATTTCGGA TTAATAGATT GAGAAAATAA GGGTTAATTT 
    GGTTTATAAG TTGTCTATAG TTGGAGTGAA AATATAGTAT AAACTTGTGT 
    GTGTTGATAT ATGCCTTGGT TAAAATGTAT AGGTAACATC TCCATATGGG 
    AAGGAACTGT ACAAGATAGC AAACGTGACA CACGGTCAGG CTGCGTTTAC 
    AACGAGCGAG AGTGGAACAT TCTTAGCTTG TTTAGCAATG CATCACGACC 
    AGTCACATCA CTCAGTCAAT AGCTCTGTTA TCGTCAGTCT TGATTGGAAG 
    ATGGGTATCA GAGCCAAAGA CTGGGATTCT GTTGCTAAAA AAGAAAAGAT 
    CGAGGCAAGT CCTTCATTTC CAATTCTAAT ATATGATTAT AATAATCTAA 
    AAAAACACAT GTAATTGAAT ATATG

AT3G10780.1

Model type
Protein coding
Short Description
emp24/gp25L/p24 family/GOLD family protein
Computational Description
emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: embryo, sperm cell, pedicel, pollen tube; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G09580.1); Has 1529 Blast hits to 1527 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 818; Fungi - 344; Plants - 225; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G03450.1

Model type
Protein coding
Short Description
Ankyrin repeat family protein
Computational Description
Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G03440.1); Has 22492 Blast hits to 11630 proteins in 488 species: Archae - 24; Bacteria - 1675; Metazoa - 12211; Fungi - 1719; Plants - 2554; Viruses - 43; Other Eukaryotes - 4266 (source: NCBI BLink).
Link
InterPro Scan - TAIR