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ET13476

CSHL Arabidopsis genetrap mutant lines

Original: ET13476

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13476

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24384091 [Map]; Strand: c
      • AT5G60670.1 - [+] show detail - Ribosomal protein L11 family protein
        Distance: -2498; Region: intergenic
      • AT5G60680.1 - [+] show detail - Protein of unknown function, DUF584
        Distance: -2054; Region: intergenic
    Flanking Genome Sequence: ET13476 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGCTTAG ACTAATATTG 
    ACCCTATAAT GTTTTTCAAT ATACAACTAA ATTGCTTCGA CGTAATAAAA 
    AAAAAATCTT AAAATGAAAG CGTAAATGGG GATAGACCCA AAAACCTCAC 
    CAAAAAAAAA AAAAAAAAAT GGAGGTTTTT TTGGAGCAAA ACCTTTACCA 
    GGCAAGGGGG GCCCACCCAA ATTT

AT5G60670.1

Model type
Protein coding
Short Description
Ribosomal protein L11 family protein
Computational Description
Ribosomal protein L11 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11, conserved site (InterPro:IPR020785), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: Ribosomal protein L11 family protein (TAIR:AT3G53430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60680.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF584
Computational Description
Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT3G45210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR