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ET13501

CSHL Arabidopsis genetrap mutant lines

Original: ET13501

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13501

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19268015 [Map]; Strand: c
      • AT2G46890.1 - [+] show detail - Protein of unknown function (DUF1295)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13501 - 5-prime edge 
    CTTTATCCCT GATTCTACCT CACCTTTCTC AGTAATTACT CTTCATCTTC 
    CGATTCAGAG CTCTCTTCTA TTCAATCATG GTGTTTGAAT CATCCTCTTC 
    TATTAGCAAA CCTTCTCTTC TTCTTAAACG TCAATGTGCT CTTCTGGGTC 
    ATCGGTTTAC TCCAATCTAG CCACTGGGTA CGCATCCATA GTCTCCAAAT 
    CTGTTACCCA TTTGTTAAAA TTCGCAATTT TTTAGTTTTT GAAAAAATTC 
    GTTAATTTTG CAGATGATCG ATGTGTATTG GACAGTGATA CCTGTAATGC 
    TGGTTCATTA CTTCGCTTCG CATCCATTGT CACAGTACAA TAAGCTGAGA 
    TCCATGATTG TCATAACTCT GACATGGATT TGGAGCATTA GGTTGACTCA 
    TAACTACTTC CGGCGGGAAA ATTGGGAATG GGGAGCTAGA GAAGACTGGA 
    GGTTCAACGA CTTACGGAAA CAGTACGGGA AACACTGGTG GTGGCTCTCC 
    TCTCTNCCTC GGCTACGTTT CTCAGCAGGT ACATGACCAC CAACTGTTCG 
    ATGAATTGCC TCAAAGAGCT CGTTTTTAAT CTAAGCTTGC CTTTATGAGG 
    ATGATTTGGA GAACAGGATA GTCTTTTGGT TATAAGGGCT TGAACCATTG 
    TTACCTTTAT ATATATTTGA TGCTTAGCTT ATATGCTTTC TGTTTCTCAT 
    GGTGCTTCTT TTTTCCAAAA TTTGCTCAGA TCTTC

AT2G46890.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1295)
Computational Description
FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system, integral to membrane, cytoplasm; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), Protein of unknown function DUF1295 (InterPro:IPR010721); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1295) (TAIR:AT1G18180.1); Has 1895 Blast hits to 1895 proteins in 350 species: Archae - 2; Bacteria - 474; Metazoa - 74; Fungi - 141; Plants - 112; Viruses - 0; Other Eukaryotes - 1092 (source: NCBI BLink).
Link
InterPro Scan - TAIR