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Mutant Lines
ET13509

ET13509

CSHL Arabidopsis genetrap mutant lines

Original: ET13509

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13509

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 1; Position: 25404423 [Map]; Strand: w
- AT1G67750.1 - [+] show detail - Pectate lyase family protein
  Distance: 920; Region: intergenic
- AT1G67760.1 - [+] show detail - TCP-1/cpn60 chaperonin family protein
  Distance: 1157; Region: intergenic

TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGTTACG ATGAACGTGA 
AGGTTGTGTC CCATTCCTAA TTCCAAAAAA CCATAACTAT CCACATGGTA 
CCAAAACTTC CAAAATTAGC CCAAAATCAA CAAATTAACA AAACAACAGA 
AAGAGATAAA ATAGTTCTCC ACCGACAAAG TTGCTGATAA ATAATTCATT 
TGTTTACTCC TACAAAGATA CAACATTGCA CTCAAAATTA AGTACTTATT 
TGCAATGGTC ATATGATTAC AATTGGATTA TAGAAACATT TAATGTACAT 
TCTGAGTAAC TTTGAAAAAC TGCAGCTCCT CATTTGGATT TTGGTACCTT 
ATCATTTATT GCAATAATTG TCCAACGCCA CGTCTCGGGA AGGGAAGAGA 
GCAAAGAGCG AGATCCAGAT CTGGTCCAAT TAGTGGAGAT TCTGTTCTAG 
TTTTGTCAGA CTCACGAAAC CAACACTTAT TACAGATCTT GCAGACAAAT 
TAAATGTCAT CGCAAAAATT AGATATGCCC ATGTTACACA CTGCGACCAA 
TGTAACCATA TGTGAATATA TTCTCTACCA CTACTATATG CCACAAACAT 
AGTTCACATA TTCAACTGCA ATATACAATA TCCTGTGATT AATTTGGTCT 
TCGGTTCGAT CTTTTTTATA ATCAGATGAG AATTTAAGCC GAAATTCATA 
TACTAATCTG CGTTGTCTAA AATC

5 prime edge [+] show sequence

Chromosome: 4; Position: 303090 [Map]; Strand: w
- AT4G00730.1 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
  Distance: 0; Region: exon4 (CDS)
- AT4G00730.2 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
  Distance: 0; Region: exon4 (CDS)

TTCCATCCTA CTTTCTCTCT GTCAACGAGG AGTTGTAGTG GTGATTATGG 
TGGTGGCCAA GGAACTTACC GGTGAGGTTA CAGACACGAT CAAGGTCGTC 
TTTTAAACGA GCGTTTTCGA TACGGAGATG ATGTTCTTCA AGAGAGACAT 
CACCAAGCAT GGCAGGTCCA CCACAATTGG TGCAGATTGG ATTCCTCATT 
GCTTCACGAA TAGACATGTT CTCAGCTCTT AACTTATCGT TCTCTTGTCT 
CAATAACGCG TTCTCATGCC TCTCTAATTG AGTCTGCGCC ACAATATGAT 
TTTATTACAA AAGAATTCAT TTTTTGGGAT TAAAGATGTG ATTTAATCTC 
CACATACCTT

AT1G67750.1

Model type: Protein coding
Short Description: Pectate lyase family protein
Computational Description: Pectate lyase family protein; FUNCTIONS IN: pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1); Has 1739 Blast hits to 1731 proteins in 272 species: Archae - 0; Bacteria - 767; Metazoa - 0; Fungi - 258; Plants - 701; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G67760.1

Model type: Protein coding
Short Description: TCP-1/cpn60 chaperonin family protein
Computational Description: TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), T-complex protein 1, epsilon subunit (InterPro:IPR012718); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT1G24510.1); Has 1127 Blast hits to 982 proteins in 329 species: Archae - 446; Bacteria - 0; Metazoa - 192; Fungi - 185; Plants - 115; Viruses - 0; Other Eukaryotes - 189 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00730.1

Model type: Protein coding
Short Description: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary: Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development
Computational Description: ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 12660 Blast hits to 12608 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9962; Fungi - 223; Plants - 2228; Viruses - 1; Other Eukaryotes - 246 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00730.2

Model type: Protein coding
Short Description: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary: Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development
Computational Description: ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR