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ET13561

CSHL Arabidopsis genetrap mutant lines

Original: ET13561

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13561

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18732890 [Map]; Strand: c
      • AT3G50480.1 - [+] show detail - homolog of RPW8 4
        Distance: -178; Region: promoter
    Flanking Genome Sequence: ET13561 - 3-prime edge 
    ACTTTCTCCC TGATTTTTAG TAGTAACTTC TTTTGTTGAA ATATTTTTAG 
    TTGATACCAC CATTTTCCTC TTCTGCTTTT TGGCTTCCTT CTCTGTTTTT 
    CTTCTTCTGT TCTTCCTCAG CCAACTTCGT CGATTGACGC TCGCTTCTTC 
    GACGTAATTT AATACTCAGG ACAATTTGCA TATAAACCCA ACGATCTCTT 
    CTTACCTAGA AAAAAAGAGA GTTGACCCGT ACAGTACTAA GTCTATGAGT 
    CAATCTCTTT TGTCTTCATA TAATTAAAAC CACACGTTAA CTTGTTAAAC 
    ATAAGACTAT TTAATATGGT TCCATCCTTG ATCCTTCCAT AAACATAGAT 
    TCCTCTATAT TCAGCCCCGG CTATCAGATC GTCTTCTTTA TCGCTCCTCT 
    AATTATATT

AT3G50480.1

Model type
Protein coding
Short Description
homolog of RPW8 4
Curator Summary
Homolog of RPW8
Computational Description
homolog of RPW8 4 (HR4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Powdery mildew resistance protein, RPW8 domain (InterPro:IPR008808); BEST Arabidopsis thaliana protein match is: homolog of RPW8 3 (TAIR:AT3G50470.1); Has 106 Blast hits to 90 proteins in 15 species: Archae - 14; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR