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Mutant Lines
ET13684

ET13684

CSHL Arabidopsis genetrap mutant lines

Original: ET13684

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13684

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 5; Position: 5430061 [Map]; Strand: c
- AT5G16580.1 - [+] show detail - beta glucosidase 2
  Distance: -2589; Region: intergenic
- AT5G16590.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
  Distance: -1620; Region: intergenic

CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTATAGTA 
GGACTAGAAA GCTTTGAATC TTATAATACT TTAACGAAAA AAATTTTGAA 
CTAAACCAAA TATCACAACT GTCTGTGAGC TATTATTGTA TTCGCACCAC 
CCAATTAGAA TTTTGATAGG TACTACAATA TTAAGTTTGT GATAACAGCC 
AATTATTACA ATTGTTTGGT GGGTCATTAT GTTCCCGTGA CTCTGGGCTA 
TTTTGTATAT ATGTCACTAT TTTTGCCTTT CTTGTTGTAA AATTTCGAAA 
GCTCTTTATT TTCATTGGTG GGAGAGTCCT AATCTTCTTA ATT

5 prime edge [+] show sequence

Chromosome: 3; Position: 4037666 [Map]; Strand: w
- AT3G12700.1 - [+] show detail - Eukaryotic aspartyl protease family protein
  Distance: 0; Region: exon1 (CDS)
- AT3G12700.2 - [+] show detail - Eukaryotic aspartyl protease family protein
  Distance: 0; Region: exon1 (CDS)

CTACTTTCTC TCACTCGACA GTTAACTCAG ACTTGTAAAG TTGATCTGAT 
GAATCTCTTC TCACTCACTA CTTGTCCTAC TCCTTCAACT CCTTGCTCCT 
ATGATTACAG GTACTTTCTC AATTTGGTAA TGGTGATTGC ATTATTTAAT 
ACATAGTCAA AATGTGATTA GGTAGATTAT TAAGAAGTGA TGGTGATGGT 
GGGATTTACA GACATTTTAA TGGAGAACAA TTTACTGTTT AAGGAATTGT 
GTGTGTTTGA GAGTTGAGAC AAGATATTTT AGATAGATTT TGGGGAAAAG 
TTTGGTGGTC AATCAATTAG AAGAAGAGGG TCCTCTCTTT CTCTGTCTCT 
CTTGTCACCA TATCATTGTC TCTTCTCATC ACATTTTCTC ACAACTATTT 
AGAGAATTCT TTGGGGTGGC ATGGATTAGA TGCAAGTGTA TTGCAAGGGA 
GGGTGAAATT AAATGTGAGT TGAGCTATAA TTCAGCACAA TACATAAATG 
TCACTTATTG TATGACTTGT GAGTTAGGTT TGACATTTGA GCATACATAA 
ATTCAATCTC TCTTATGACA TTTAACCTAA TACAAAAATT GTTAATGTAT 
TGTATTAACA TTAATTTTTT CGGTTGGGTT AGATATGCAG ATGGGTCAGC 
AGCACAAGGC GTATTCGCAA AGGAGACTAT CACAGTTGGT CTCACTAATG 
GTCGTATGGC TAGACTCCCT GGTCACCTCA TTGGTTGTAG TAGT

AT3G12700.1

Model type: Protein coding
Short Description: Eukaryotic aspartyl protease family protein
Computational Description: Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G25700.1); Has 3537 Blast hits to 3526 proteins in 338 species: Archae - 0; Bacteria - 0; Metazoa - 933; Fungi - 442; Plants - 1963; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G12700.2

Model type: Protein coding
Short Description: Eukaryotic aspartyl protease family protein
Computational Description: Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G31450.1); Has 1235 Blast hits to 1233 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 149; Plants - 889; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G16580.1

Model type: Protein coding
Short Description: beta glucosidase 2
Computational Description: beta glucosidase 2 (BGLU2); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 2 (TAIR:AT4G22100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G16590.1

Model type: Protein coding
Short Description: Leucine-rich repeat protein kinase family protein
Computational Description: Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, response to symbiotic fungus; LOCATED IN: plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G02880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR