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ET13694

CSHL Arabidopsis genetrap mutant lines

Original: ET13694

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13694

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4037659 [Map]; Strand: w
      • AT3G12700.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G12700.2 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13694 - 5-prime edge
    TTCCATCCTA CTTTCTCCCG TTGGATGTTT AACTCAGACT TGTAAAGTTG 
    ATCTGATGAA TCTCTTCTCA CTCACTACTT GTCCTACTCC TTCAACTCCT
    TGCTCCTATG ATTACAGGTA CTTTCTCAAT TTGGTAATGG TGATTGCATT
    ATTTAATACA TAGTCAAAAT GTGATTAGGT AGATTATTAA GAAGTGATGG
    TGATGGTGGG ATTTACAGAC ATTTTAATGG AGAACAATTT ACTGTTTAAG
    GAATTGTGTG TGTTTGAGAG TTGAGACAAG ATATTTTAGA TAGATTTTGG
    GGAAAAGTTT GGTGGTCAAT CAATTAGAAG AAGAGGGTCC TCTCTTTCTC
    TGTCTCTCTT GTCACCATAT CATTGTCTCT TCTCATCACA TTTTCTCACA
    ACTATTTAGA GAATTCTTTG GGGTGGCATG GATTAGATGC AAGTGTATTG
    CAAGGGAGGG TGAAATTAAA TGTGAGTTGA GCTATAATTC AGCACAATAC
    ATAAATGTCA CTTATTGTAT GACTTGTGAG TTAGGTTTGA CATTTGAGCA
    TACATAAATT CAATCTCTCT TATGACATTT AACCTAATAC AAAAATTGTT
    AATGTATTGT ATTAACATTA ATTTTTTCGG TTGGGTTAGA TATGCAGATG
    GGTCAGCAGC ACAAGGCGTA TTCGCAAAGG AGACTATCAC AGTTGGTCTC
    ACTAATGGTC GTATGGCTAG ACTCCCTGGT CACCTCATTG GTTGTAGTAG
    TTCCTTTACA GGACAGAGCT TCCAGGAGC

AT3G12700.1

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G25700.1); Has 3537 Blast hits to 3526 proteins in 338 species: Archae - 0; Bacteria - 0; Metazoa - 933; Fungi - 442; Plants - 1963; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G12700.2

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G31450.1); Has 1235 Blast hits to 1233 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 149; Plants - 889; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link
InterPro Scan - TAIR