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ET13724

CSHL Arabidopsis genetrap mutant lines

Original: ET13724

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13724

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4037601 [Map]; Strand: w
      • AT3G12700.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G12700.2 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13724 - 3-prime edge
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGT 
    CTTAAAGCTC TTTGATTCGT CAGCTCTAAA CACTCTCCGA TTGTCTTTGC
    CTCTCGCACG GTATCTACAA TTCACCCAAG TAAGCTCGCT TCCTGTATCA
    ACCACCACTC TGAACTTCTT CGCCGGAGTT CCAACTCTAA TCTCCGTGAA
    ATACTGCGCC GTTCCGTAAT CAATCCCTGA TCCCAAATCC ATTTTCACTC
    CTACTGTGGA GTTACGCTTC CGAGATATCA AACTATGACG CTTCTGGTCG
    GCGCCGATAA TGTCCTCAAT GCGGCTGAGA GGTTTCGGCA AGAGAGTGTC
    CCTGTGCGCT AATTTTAGCC GCACCGAGGT GTCTTTCATG TNCATCTGCC
    AAGGTGATTA GGAGGAGCGT CGTGATGAGA CATGAGAGCA ATGTCTTCTG
    CATTTTTTCT TCTTGATTTT TTTTGTCCCC TGTTGGGTTC TGTTTCCAAA
    ACAGAGTATT TATATACATT GATGAAACGC CTTTCTCTCA TGGGGATGAT
    CTTTGTTAAT TAATATGGGG CAGTTGTCCC CCCCCCTAAA TTTTTGAATT
    TTCTTAAGCA TTTTAAGGAA TTAAATTAAT TGCACCCCAT AAAAAGATTC
    TCTCTTGCCC CCTCTAAATT GTTTGTTTCC CAATTAACCA ATTCTGGTTA
    TGGGGGGCAA TTAATCTCTC CAATTTTCCC CTTTAAGGGA G
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4037664 [Map]; Strand: w
      • AT3G12700.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G12700.2 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13724 - 5-prime edge
    TCCTACTTTC TCCCGTTGGA TGTTTAACTC AGACTTGTAA AGTTGATCTG 
    ATGAATCTCT TCTCACTCAC TACTTGTCCT ACTCCTTCAA CTCCTTGCTC
    CTATGATTAC AGGTACTTTC TCAATTTGGT AATGGTGATT GCATTATTTA
    ATACATAGTC AAAATGTGAT TAGGTAGATT ATTAAGAAGT GATGGTGATG
    GTGGGATTTA CAGACATTTT AATGGAGAAC AATTTACTGT TTAAGGAATT
    GTGTGTGTTT GAGAGTTGAG ACAAGATATT TTAGATAGAT TTTGGGGAAA
    AGTTTGGTGG TCAATCAATT AGAAGAAGAG GGTCCTCTCT TTCTCTGTCT
    CTCTTGTCAC CATATCATTG TCTCTTCTCA TCACATTTTC TCACAACTAT
    TTAGAGAATT CTTTGGGGTG GCATGGATTA GATGCAAGTG TATTGCAAGG
    GAGGGTGAAA TTAAATGTGA GTTGAGCTAT AATTCAGCAC AATACATAAA
    TGTCACTTAT TGTATGACTT GTGAGTTAGG TTTGACATTT GAGCATACAT
    AAATTCAATC TCTCTTATGA CATTTAACCT AATACAAAAA TTGTTAATGT
    ATTGTATTAA CATTAATTTT TTCGGTTGGG TTAGATATGC AGATGGGTCA
    GCAGCACAAG GCGTATTCGC AAAGGAGACT ATCACAGTTG GTCTCACTAA
    TGGTCGTATG GCTAGACTCC CTGGTCACCT CATTGGGTTG TAGTAGTTCC
    TTTACAGGAC AGAGCTTCCA AGGAGCCGAT GGGGTTCTTG GTTTAGCCTT
    TAGCGATTTC TCCTTCACTT CCACAGCCAC TAGTCTCTAT GGTGGCAAAT
    TTTCATACTG CCTTGTTGAC ATCTTTCC

AT3G12700.1

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G25700.1); Has 3537 Blast hits to 3526 proteins in 338 species: Archae - 0; Bacteria - 0; Metazoa - 933; Fungi - 442; Plants - 1963; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G12700.2

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G31450.1); Has 1235 Blast hits to 1233 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 149; Plants - 889; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link
InterPro Scan - TAIR