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ET13736

CSHL Arabidopsis genetrap mutant lines

Original: ET13736

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13736

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1930899 [Map]; Strand: w
      • AT3G06370.1 - [+] show detail - sodium hydrogen exchanger 4
        Distance: 0; Region: exon15 (CDS)
    Flanking Genome Sequence: ET13736 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAGTTCCAG GTTCACCCAT 
    TGAGAATAGT GTTCCGCAAT GGAGTGAAGA AGTAGAAAAC AAGGAACAAA 
    ACGGCGAACC TTGATGACCA TAATGACATG AGTAAGATCT TTGACTTGTT 
    GATCGCGTTT TTTGGCGTTG TTGGACGCAG ACGCAACATG GGCCGGCTCT 
    AATTTTTTGC CTCCAGTTTT GGTATAATGG TTTTGGATGT GAGTTCTTAT 
    TTGCCCGGTG TGATTTTTTG GTTTGTGGTG TGATTTTGTA AAGCCGGTCC 
    GTTTTTCGTT GTTTGAGTTT GTGGTTTTGT TGAAAAATTG TAACTGTCCA 
    TGTAAATAGG GACTGATATA GGGGTGACTT GTGAGAGTGA CTTGAGTACA 
    CCTAGCTCAT ATGCAGACGT TAGCGTCTGC GTTTGGAGAT TCGAGTTTGC 
    GTTGGTGGGA CGTGAGCAGA TTTTTTAATC TAAAGTTTGT GTACACTTTC 
    TTGTACTTCT TATACAAAAC AAAGGGACAC GAATCTTTCT AATGTTCATA 
    ATTTATTACT GGGTTTTGCA AGAAACTTGT TGACAATATA CAAATAAACT 
    GATAACTTAT ATATAAATAT AACTTTTGAG AAATCTAATC TTATTTTTAT 
    GCTTGCACGT ATATAAGGAC AAAGTGAGTG GGTATCAATC AACCTTATAG 
    AACATATACA ATCTTTCACG C

AT3G06370.1

Model type
Protein coding
Short Description
sodium hydrogen exchanger 4
Curator Summary
member of Sodium proton exchanger family
Computational Description
sodium hydrogen exchanger 4 (NHX4); FUNCTIONS IN: sodium:hydrogen antiporter activity, sodium ion transmembrane transporter activity; INVOLVED IN: response to salt stress, sodium ion transport; LOCATED IN: vacuolar membrane, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Na+/H+ exchanger, subfamily (InterPro:IPR004709), Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Na+/H+ exchanger, isoforms 1-4, conserved region (InterPro:IPR018407); BEST Arabidopsis thaliana protein match is: sodium hydrogen exchanger 2 (TAIR:AT3G05030.1); Has 5892 Blast hits to 5885 proteins in 1663 species: Archae - 61; Bacteria - 4002; Metazoa - 840; Fungi - 131; Plants - 419; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink).
Link
InterPro Scan - TAIR