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ET13740

CSHL Arabidopsis genetrap mutant lines

Original: ET13740

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13740

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11379863 [Map]; Strand: c
      • AT1G31772.1 - [+] show detail - Defensin-like (DEFL) family protein
        Distance: 449; Region: intergenic
      • AT1G31780.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Conserved oligomeric complex COG6 (InterPro:IPR01...
        Distance: -11364; Region: intergenic
    Flanking Genome Sequence: ET13740 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CGTATAACAT 
    TTCAGAAGTT AGTTTTTGTC ATCGAATTGG AACAAATACC AATAATTTTA 
    GTTATGTAAG ATATTATTAG GTAACCTGTT ATTCTCTCAT TCTTAGAATT 
    AATATTTCAA CGATAAAACT AATTAATATG TTAAGAAATA TATTCGGACT 
    TGAAAAGAAG AGTAAGATTT ATTATATTTT ATTTTCGTTA ATATGATGAA 
    ACAAGAGACA GTTTCGTTAT ATGTGGAAAC GTTGTATGGT CGGAAATAGC 
    CGGTGAGCAT AAGATAACCA ATTTGAGTAA TGAAGAGCGA ACCAGGCTAG 
    GTCTTTGTAT ATGTCAGGTA AATGATCGCT TAAAACACAT AAGTTAACCA 
    AAAGGCCTCC CGTTCCTCCA CCTGATTTTC AAACTTGAAA CTTGCGATCG 
    AGCACAAAAG GAGTCCCAAC TTAAAAGTTA TACCCTTAGC CACTACTATC 
    ATATGAACAC ATAATTTAAT AATCAACTGT GAAGTATTAT TTATAGTGAC 
    AACTGTATAT AAAATAGA

AT1G31772.1

Model type
Protein coding
Short Description
Defensin-like (DEFL) family protein
Curator Summary
Encodes a defensin-like (DEFL) family protein.
Computational Description
Defensin-like (DEFL) family protein; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G31780.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Conserved oligomeric complex COG6 (InterPro:IPR010490); Has 384 Blast hits to 379 proteins in 190 species: Archae - 0; Bacteria - 4; Metazoa - 151; Fungi - 156; Plants - 42; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Link
InterPro Scan - TAIR