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ET13747

CSHL Arabidopsis genetrap mutant lines

Original: ET13747

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13747

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 157989 [Map]; Strand: w
      • AT2G01320.3 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon1 (CDS)
      • AT2G01320.2 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon1 (CDS)
      • AT2G01320.4 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon1 (CDS)
      • AT2G01320.1 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13747 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCGGGGCT 
    CTGGCTGCGG TGGCCGCCGC TCTGTTGGTC CGCCTCTTCG CTGGACCTGG 
    CATCGCTCTC TTACCTGAAG ACGAAGCTGA AGATGATTAC GCTGAGACGG 
    AAGACGGTGG TGGTGATTCA ATTCGTCCGG TGACAATCCG TTGGAGGAAC 
    ATCACCTGCT CGCTCTCCGA TAAGTCCTCC AAATCGGTGA GCACATTTCT 
    CCTCACTCGA CAAGTTTCGA TTGCGCGTAT ATTAGTCTTT CCAATTTCAC 
    GTTAATAGCC GAATCAGAAT TGGTTGATTA TGTGATTCTC AGGTGAGGTT 
    TTTGTTGAAA AATGTATCCG GAGAAGCAAA ACCTGGGAGG TTGCTAGCGA 
    TTATGGGTCC TTCTGGTTCT GGGAAAACAA CATTGCTCAA TGTTTTAGCA 
    GGACAGCTTA GTTTATCTCC ACGTTTGCAT TTGTCAGGTC TCTTGGAGGT 
    TAATGGCAAA CCGAGCTCTA GCAAAGCTTA TAAGTATGTC CTATGAGTTA 
    TACAAAGTCT ATAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26593323 [Map]; Strand: c
      • AT1G70540.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily protein
        Distance: -607; Region: promoter
    Flanking Genome Sequence: ET13747 - 5-prime edge 
    TGGAAATGAG TCTCGTTTGG GGTTATTGAT GCTAACATAT GAATTTGTTG 
    TTCTAGTTTG ATGTATAAAG ATTTTGACAA ATTACACTCA CGACGAGAGT 
    GGCTTGATTA TCGTTTCATT AAAAAATTAT TTAATTCAAA AGAGTAATAG 
    TGGTGGTTAT GGGTGGAGAA GGTGCGATTA GTGGCCAGAG CTCACACAAC 
    TAAACATAAG TCAAAGCTTT CATCATTATA TAATTGCCAA CAAATTCTAA 
    TATCTTGAAA GTTGAAACTA ATTACCTAAC GTGTAGAACA CGCTCGAGAT 
    TATTCCTTTC ATCTATCCGA AGAAAAAAAA TC

AT1G70540.1

Model type
Protein coding
Short Description
Plant invertase/pectin methylesterase inhibitor superfamily protein
Computational Description
embryo sac development arrest 24 (EDA24); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: polar nucleus fusion; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G23350.1); Has 67 Blast hits to 67 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.1

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387535 Blast hits to 354405 proteins in 4108 species: Archae - 7090; Bacteria - 308145; Metazoa - 8600; Fungi - 6710; Plants - 5407; Viruses - 19; Other Eukaryotes - 51564 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.2

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387358 Blast hits to 354249 proteins in 4108 species: Archae - 7085; Bacteria - 307995; Metazoa - 8597; Fungi - 6708; Plants - 5391; Viruses - 19; Other Eukaryotes - 51563 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.3

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387349 Blast hits to 354243 proteins in 4108 species: Archae - 7085; Bacteria - 307989; Metazoa - 8597; Fungi - 6708; Plants - 5387; Viruses - 19; Other Eukaryotes - 51564 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.4

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR