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ET13765

CSHL Arabidopsis genetrap mutant lines

Original: ET13765

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13765

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 347401 [Map]; Strand: c
      • AT2G01810.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: -136; Region: promoter
    Flanking Genome Sequence: ET13765 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACTT 
    TTAACAACAA CAAACCAAAA AACACGATCG CCGCCACAAG GGCAAAACCG 
    TCAATTCACA AGTAGATCCT GTCACGTGAT CCCAATGATA AAACCAATCC 
    TCTCTCTCTC TCTCTCTTTT CTCGTAGTCC TTTTTCAGTC ATGGCGATAA 
    CCGCATACGA CGCTCTCACG GAGAGACAAA AAGCCCCCAA AGTCCTCCTT 
    ATTAACGATT TTGCCATCTC TTCTTCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 347342 [Map]; Strand: c
      • AT2G01810.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: -195; Region: promoter
    Flanking Genome Sequence: ET13765 - 5-prime edge 
    CTTTCTCCCT GGTTAAAGAA AGAGTGGAAT TTCCGGTTTA CTTGGTTTTG 
    GTTTGGGATA ACGTGAGATT GGCCTGATTT GATTGTGACG GGACTCATCT 
    TCTTCCGTGT GGTTTGTTTA TTAACGATTT TTGCCCTTTC GGCGGCGATT 
    TTGGTTCATT GGTTTTGTTA TTTTATTGCA AGAGTGGGAG TTCCGGTTAA 
    AGAGGGTTTG GTTCGGTTTA ATTTGGTTTG TGACCACGTG ACATTGGCTG 
    ATTGTTGCGA CATGTCTTTC GTGTGGGTTT GCGTGAATTG ACGATTTTGC 
    TCAATGTGAT TTCTGAATAT GTGTTCGTGT TGGCCATATG GTGTATTCAT 
    GAAAATAACT TTATAGAAGG TTAAATAGTA TTAGATTTAG GATATATGTC 
    AATCTTCTGT TTCTCTATAT TTACTCCGAT ACGTTGTTAT CTCCTATGAG 
    GCAACTGCTG TTGTATAAAT ACCTCTCAAA TTCTCAAATT CTACTCCGAT 
    ACTAAAAACT TGAATGGTAA TCGTTTTCGT ATATGGGAGT AACAAATCAA 
    GGGAAACCAA AGAGAAGCTA ATGTTGGATT ATGGAGAAAA TCAAATCATT 
    ATCTTCTGAT CTGTCTGCTC ACATAAAGAT AAACAAGGAT ATGTATAATG 
    TGAAATCTAT TTCGTTGTCC G

AT2G01810.1

Model type
Protein coding
Short Description
RING/FYVE/PHD zinc finger superfamily protein
Computational Description
RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G66170.1); Has 637 Blast hits to 622 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 216; Plants - 250; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR