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ET13778

CSHL Arabidopsis genetrap mutant lines

Original: ET13778

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13778

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 409208 [Map]; Strand: w
      • AT4G00950.1 - [+] show detail - Protein of unknown function (DUF688)
        Distance: -2066; Region: intergenic
      • AT4G00955.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -2910; Region: intergenic
    Flanking Genome Sequence: ET13778 - 3-prime edge 
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACCA 
    AATAGATACC TTAAAGTCAG AGTATGTTTT GCGCATATAC ATAGATTGTG 
    AGTGCTTCGC TAAAGAATCA GCCGAGACAT TTGCTGATCT GGGAATAAAA 
    CTACAAGAGA AGCTAGAAAG CCTATTAATG CAGATAAATA TGTCACTCAG 
    AATATGTAGA TAAATAGTTT AATTTGCTGA CCTTTTTGGT TCTATGATTT 
    GAAATTATTC TCTGAGACAT ATTCTTGATT GATCAAGTTC TTTTTCACCT 
    TTTATGTCCC TCTTTTTCCC CTATAATTCA AATCAGATTC TTCTTTTATG 
    ATATTACATC TAGTTCTTTG TTTTTTGAAA TTGATAAGTG GAGGGATAAC 
    AACGAGACTG GACATGGAAG AAAGTTCCAA AATAAAGTAG CTCATAGTCT 
    GAGGATAATA ATCTTTAAAT GTTTCTTTGG AACCTTCATT TTCATTTCTT 
    TATTACTTTT GTTTCTTGGC TGTGCTCGTT TCAAATCGAG TCCATTGCAT 
    TACAAAACTC TCTTTCGGGC CTTTGTGCTC TGCCTTAATT TTCTTTTGTT 
    ATTTACTCTT TTCTTTGTCA GAACAACAAC AATATCTAGG CAAATAAAAG 
    AGGTTTTTAA ATTCTATAAT CGTTATCATA GTTTCATTAT TTCTATATGT 
    TTAGACAGAA ATGTTGTCTT GATTGAATCA AGGTTCCTTT CTTAGAAAAA 
    A

AT4G00950.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF688)
Computational Description
maternal effect embryo arrest 47 (MEE47); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00955.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G23450.1); Has 94 Blast hits to 88 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR