1. Home
  2. Mutant Lines
  3. ET13827

ET13827

CSHL Arabidopsis genetrap mutant lines

Original: ET13827

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET13827

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1256773 [Map]; Strand: c
      • AT4G02810.1 - [+] show detail - Protein of unknown function (DUF3049)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13827 - 3-prime edge 
    AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT TACTGCCTTA 
    ATTGGAAGCA GCAGCAATTT TGGGTGACCA CTTAATGGGA ATTACTCAAC 
    TCAGCAAATA ATTATTTTTT ACGACCGCAA TAATTAGTAT TATGGCCTAT 
    TTATTTTGAT TGTTTAAGTG TGATTTGTAA TATGGAAGAC GATGAGTGTT 
    TTCTTAGTCC CATTGTATGA CTATACGGCT TCTAATTCTA CATATATAAA 
    TGCTAAAATG TGAGTTAATT GTTACTTAAA CTGTTAAACA ACATAGAGTA 
    CTCATCTTCA TTATCTGTTT TTACCTTTTT AGTATGTTAT AGCTAACCTT 
    TGATTATTAA TATGTCTAGT ACAAACTTTG CGAAGATGCG GATTCATACA 
    CACCAATACA TACATTTAAT AGTGAATCTG TTATATGCCA ATATACATGA 
    CGAGTTTGTT GAAATTTATC ATGATTTTAT GAAATTAAAA AAACAGGGAA 
    TATAGATGTT ATAAACCGAC TTAGTTTTAG TTTTGTTGTC ATAGACTAAC 
    GAGAGTGACA CTATAGTTTA AAAAAGGGTA ATAAAGTACC AGTAATAGTG 
    AGACTGACGA ANACTACATG ATCACTTTCA AAAAACTTCA TTGAAATTTT 
    GGTAACATCA TCTACACTAG TTTGC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1256962 [Map]; Strand: c
      • AT4G02810.1 - [+] show detail - Protein of unknown function (DUF3049)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13827 - 5-prime edge 
    CCAGCATAGT TTTAGGCTCA CACCCATTTT CATTGCATCT CCTTTTTGGC 
    CTGTTGCTAA CCTTTTTATT TCCACTTTTA CCCTCAAAGT TCTACATTAT 
    TCCCCACAAT GCCCTCCTCG ACCTCTTCTT CTTCTTCTTC TTCTTCCGCT 
    GCATCGAATT GATCATCTTC ATCTCTCTCG ACCAAC

AT4G02810.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3049)
Computational Description
Protein of unknown function (DUF3049); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT1G03170.1); Has 61763 Blast hits to 21586 proteins in 896 species: Archae - 112; Bacteria - 2155; Metazoa - 26171; Fungi - 6892; Plants - 3461; Viruses - 1647; Other Eukaryotes - 21325 (source: NCBI BLink).
Link
InterPro Scan - TAIR