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Mutant Lines
ET13840

ET13840

CSHL Arabidopsis genetrap mutant lines

Original: ET13840

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13840

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 404786 [Map]; Strand: c
- AT1G02140.1 - [+] show detail - mago nashi family protein
  Distance: -330; Region: promoter
- AT1G02145.1 - [+] show detail - homolog of asparagine-linked glycosylation 12
  Distance: 0; Region: exon2 (CDS)
- AT1G02145.2 - [+] show detail - homolog of asparagine-linked glycosylation 12
  Distance: 0; Region: exon2 (5UTR)
- AT1G02145.3 - [+] show detail - homolog of asparagine-linked glycosylation 12
  Distance: 0; Region: exon2 (CDS)
- AT1G02145.4 - [+] show detail - homolog of asparagine-linked glycosylation 12
  Distance: 0; Region: exon2 (5UTR)

GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTATCTGTAG 
CTGCAATCTA TGTGGTCATG GCACCATATA CTAAGGTGGA AGAGAGCTTC 
AACGTTCAGG TAGGTTTTCA AAGTATTTAG AGTCACACTC TTTCTCCGTT 
TTACTGAAAC CGTTTCACTC GTCTCAAGTC AATGCACGAC ATTCTTTACC 
ATCGCCATCA TTTGGACTCT GTGAGTGACC TCTCTTTTTA CTTCTCCTCC 
CGGACGCTTA ACTCTTTTTT TTTTTATCTC AAAAGGGAGG CCAATTTTAC 
CCGACTTCGG CCTTTTAATT TTTTCCCAAC CAGAAGGACC ATTGGGAGTC 
CCCCGGGGTT GCCCCTCAAA CTTTTATGGG AAAGGAGGGC TGTTAAATTT 
CCCTCTCGGT TTTGGCACCC CCGGTGGAGG GTTTTTTTTT AACCATAAAA 
AATAAGGGAA GGGTTTTTTT TTATCCCCCC CCAAATTGGT TTTGGAGGAA 
CCCTCAAAAC CCCGGGTTTT GCCACCCCGG GGGGAACAAT TAACCACGGG 
CTGGGGTTCC CCAAGGGTTA AAACCTTGGG GGAGGGTTCC CCTCGGGTTC 
CCCCCCCCAA AAAAAACCCC AAAGGAAACC CAAAAAATTT TCCCCAAAAA 
CCAAAAAAAA CCCATT

5 prime edge [+] show sequence

Chromosome: 1; Position: 404691 [Map]; Strand: c
- AT1G02140.1 - [+] show detail - mago nashi family protein
  Distance: -235; Region: promoter
- AT1G02145.1 - [+] show detail - homolog of asparagine-linked glycosylation 12
  Distance: 0; Region: intron1 (CDS)
- AT1G02145.2 - [+] show detail - homolog of asparagine-linked glycosylation 12
  Distance: 0; Region: intron1 (5UTR)
- AT1G02145.3 - [+] show detail - homolog of asparagine-linked glycosylation 12
  Distance: 0; Region: intron1 (CDS)
- AT1G02145.4 - [+] show detail - homolog of asparagine-linked glycosylation 12
  Distance: 0; Region: intron1 (5UTR)

CATATCCTGC TCCCACCAAT CGAAAGTTTC AGTTATATAA AAAAAGAAAA 
AGAGATCATC TGGCCGCCTA AGAAGACGAA ACGAAGAAAT TACCATAGGA 
TTGAAGAAAC TTGGCCATTT TCGAATCCGT CGGCATCGTC TCTGTATCGG 
GGAATCGGAA ATCAGGCAGC CCGGATACAC ACACAATTTC GATGGAAACA 
GAAAAACTAA AACTGGGCCT TAACTTTTCG GGTTACAAAT GGGTTCTGGC 
CCAATATGTA AGCCCATTAC CTTTTTTCTT TTGCGGGGAC GGACTTAAAG 
AAGGGCAAAG GACACGGAGA GGTAATCTCG ATCTCGAGAA AGAAAGAAAA 
AAAGAGAAGG CATGGCCGCG GAAGAAGCGA CGGAGTTCTA CCTGAGATAC 
TATGTCGGTC ACAAAGGGAA ATTTGGACAC GAGTTCCTGG AGTTCGAGTT 
TAGAGAGGAC GGTAAGCTCC GTTACGCCAA TAACTCTAAC TACAAGAACG 
ATACTATTAT CCGCAAGGAG GTATTTCTCA CCCCCGCCGT GCTCAAGGAA 
TGCAAGCGTA TCGTCTCCGA GAGCGAGGTC CTTTTTCTCT CTCTCTTCCG 
ATTTGCTTCT CTCTTGTTAA TTGTCCGCGT T

AT1G02140.1

Model type: Protein coding
Short Description: mago nashi family protein
Computational Description: MAGO NASHI (MAGO); FUNCTIONS IN: protein binding; INVOLVED IN: pollen tube guidance, sex determination, embryo development ending in seed dormancy; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mago nashi protein (InterPro:IPR004023); Has 476 Blast hits to 476 proteins in 200 species: Archae - 0; Bacteria - 0; Metazoa - 223; Fungi - 96; Plants - 76; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G02145.1

Model type: Protein coding
Short Description: homolog of asparagine-linked glycosylation 12
Computational Description: homolog of asparagine-linked glycosylation 12 (ALG12); FUNCTIONS IN: alpha-1,6-mannosyltransferase activity; INVOLVED IN: ER-associated protein catabolic process, protein amino acid terminal N-glycosylation; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); BEST Arabidopsis thaliana protein match is: Alg9-like mannosyltransferase family (TAIR:AT5G14850.1); Has 794 Blast hits to 784 proteins in 185 species: Archae - 0; Bacteria - 23; Metazoa - 309; Fungi - 268; Plants - 100; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G02145.2

Model type: Protein coding
Short Description: homolog of asparagine-linked glycosylation 12
Computational Description: homolog of asparagine-linked glycosylation 12 (ALG12); FUNCTIONS IN: alpha-1,6-mannosyltransferase activity; INVOLVED IN: ER-associated protein catabolic process, protein amino acid terminal N-glycosylation; LOCATED IN: intrinsic to endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G02145.3

Model type: Protein coding
Short Description: homolog of asparagine-linked glycosylation 12
Computational Description: homolog of asparagine-linked glycosylation 12 (ALG12); FUNCTIONS IN: alpha-1,6-mannosyltransferase activity; INVOLVED IN: ER-associated protein catabolic process, protein amino acid terminal N-glycosylation; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); Has 793 Blast hits to 783 proteins in 185 species: Archae - 0; Bacteria - 23; Metazoa - 309; Fungi - 268; Plants - 100; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G02145.4

Model type: Protein coding
Short Description: homolog of asparagine-linked glycosylation 12
Computational Description: homolog of asparagine-linked glycosylation 12 (ALG12); FUNCTIONS IN: alpha-1,6-mannosyltransferase activity; INVOLVED IN: ER-associated protein catabolic process, protein amino acid terminal N-glycosylation; LOCATED IN: intrinsic to endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); BEST Arabidopsis thaliana protein match is: Alg9-like mannosyltransferase family (TAIR:AT1G16900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR