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ET13847

CSHL Arabidopsis genetrap mutant lines

Original: ET13847

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13847

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7611527 [Map]; Strand: c
      • AT1G21670.1 - [+] show detail - LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structure...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13847 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAGCTG CAGAGGTGAC 
    GCAACTGGAC GTAAAACTCC TCGGAATCTC CTCCAAAGCC TCAAAACAAC 
    TTCAAACGAC CTCTCTCTCT TCAGATTCGA CGGTGCGTTC CCGTCTATCT 
    CGCCGGAAGG TGACAGATTC GCGTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7611438 [Map]; Strand: c
      • AT1G21670.1 - [+] show detail - LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structure...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13847 - 5-prime edge 
    ATGGTATCCG ACTCGGGACG AGTCAGGGGA AAGAAACGGG TTAAAGTGAT 
    GACTCTTCGG CGAGACTAAA CGAGTCAACT CGACGAACTC GTTCTTCTTT 
    AAATCGAAAA GCTCCACGTG GCGGATTTCT GATCCAGGCC TCCTTGTAGC 
    CACCGCGATG AAGTTGTTAT TGTTTGGTGA CGTGGCGGGT GTGAAAGCGT 
    GAAGACCCGG TGGTGTGACT CTTTGAATCG TAACCGATTT GGTGGTAACC 
    GGTCCGGTTT TGGGTAAAAT CGCTCGGTAC ACGCTGATCC AACCGTCGTC 
    GCTTTTCCGG TGGAAATACA GAGTCGAGTC ATCGACCCAT CTCGGCCACC 
    CGCCTTGCTC GACCACCTTG ACTCGCTGAG TTCCATCCTG AGTCAGGAAA 
    ACGTAGACGT CTGAACTAAT CTCTTTCTCT ACCATGCTCC AAGTCCAGCC 
    TTTCTCTCCA AACGAAGCCA CGGCAGTCCA CTTCCCAGAC GGAGACACAG 
    CCGGAGAAAA GTCAGCGATA CCCAGTGGTG TAAGCCGCCG AGTCGACTTA 
    GTTCGTAACT CAGTCGAGTA AACAGCGGCC CAACTCGCCA TGGGCTTACC 
    CGGATTCTCA TGTGTCGACA CGTGGACAAG ATAGTCGTTT GTTAAAACAG 
    GCGTGTCTTT CATGGAATTT ACAT

AT1G21670.1

Model type
Protein coding
Computational Description
LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40-like Beta Propeller (InterPro:IPR011659), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: DPP6 N-terminal domain-like protein (TAIR:AT1G21680.1); Has 8461 Blast hits to 5060 proteins in 1257 species: Archae - 79; Bacteria - 5567; Metazoa - 37; Fungi - 70; Plants - 117; Viruses - 0; Other Eukaryotes - 2591 (source: NCBI BLink).
Link
InterPro Scan - TAIR