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ET13868

CSHL Arabidopsis genetrap mutant lines

Original: ET13868

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13868

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4953791 [Map]; Strand: c
      • AT3G14740.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: -449; Region: promoter
      • AT3G14740.2 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: -368; Region: promoter
      • AT3G14750.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: ET13868 - 3-prime edge 
    AACGGTAGAG GATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAGTGG 
    TGGCGGCTGC TGCTGCTGTT GCTGTTGCGG ATCGTAGCCA CCAGCCCACG 
    CAGCCTGTGG TCCGTAAGGA GGAGGATAAT AGCCAACAAC GCCTGTTTGT 
    GCCTGAACCA GCATTGTTAT CATATCAGCA CATTACTTTA CATGTGTATG 
    AATGTATGCA CCTAAAACTA CAAGAATAGG AGATATATGA AGATAGATGT 
    TGTTCAGTTA CATATTCTGT CACAGGTTTC ATCGACATCA GCTCACATTG 
    TTGACTTAGA TTGGTCTAAT AAATCGATTA AGCCAGTTCC GTTTTACATC 
    AGATTGACTT GTTCGAACTT TAGGCTGTAC TATTGGCTAC TGAAATTCGG 
    TTTAAATTCA AAGTTCAAAC AAAGTGTGAA ACTGTGTAGA GAGAATTATG 
    GTGCGTTCAG ACATATCATC TACTATGCAC ACGCAATGTA AAAAAATATA 
    AAAAGTCAAA ATTTTATAAC TTACTGGATT CATGGTATAG TTGGGTTGAT 
    AAGGATTCAC AGGATACCCA GCCTCAGGAT TTCCATATCC ACCACCATAA 
    GCAACTCCAC CTGATCAAAA CCATGTTTTT TGATTAACAT TGCTATATGC 
    ATTCAACTGT TGATCGACTG TCTATTGCTA GTTATTAGTT TTCCTTTCTA 
    CTTGTGCATT TAATAGGCAT TGTGGTGACT GCTTATAAAG GTTTA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4953787 [Map]; Strand: c
      • AT3G14740.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: -445; Region: promoter
      • AT3G14740.2 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: -364; Region: promoter
      • AT3G14750.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: ET13868 - 3-prime edge 
    ATGAAACGGT AGAGGATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    GTGGTGGCGG CTGCTGCTGC TGTTGCTGTT GCGGATCGTA GCCACCAGCC 
    CACGCAGCCT GTGGTCCGTA AGGAGGAGGA TAATAGCCAA CAACGCCTGT 
    TTGTGCCTGA ACCAGCATTG TTATCATATC AGCACATTAC TTTACATGTG 
    TATGAATGTA TGCACCTAAA ACTACAAGAA TAGGAGATAT ATGAAGATAG 
    ATGTTGTTCA GTTACATATT CTGTCACAGG TTTCATCGAC ATCAGCTCAC 
    ATTGTTGACT TAGATTGGTC TAATAAATCG ATTAAGCCAG TTCCGTTTTA 
    CATCAGATTG ACTTGTTCGA ACTTTAGGCT GTACTATTGG CTACTGAAAT 
    TCGGTTTAAA TTCAAAGTTC AAACAAAGTG TGAAACTGTG TAGAGAGAAT 
    TATGGTGCGT TCAGACATAT CATCTACTAT GCACACGCAA TGTAAAAAAA 
    TATAAAAAGT CAAAATTTTA TAACTTACTG GATTCATGGT ATAGTTGGGT 
    TGATAAGGAT TCACAGGATA CCCAGCCTCA GGATTTCCAT ATCCACCACC 
    ATAAGCAACT CCACCTGATC AAAACCATGT TTTTTGATTA ACATTGCTAT 
    ATGCATTCAA CTGTTGATCG ACTGTCTATT GC

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4953736 [Map]; Strand: c
      • AT3G14740.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: -394; Region: promoter
      • AT3G14740.2 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: -313; Region: promoter
      • AT3G14750.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon4 (3UTR)
    Flanking Genome Sequence: ET13868 - 5-prime edge 
    TCCTACTTTA TCCCTGACCC CACAAGGACA AGGACATCGA TGAAAAAGTC 
    AAGATTCAAA GTCAAAGTCG CCCATTTTTC AAGCGACTCT CATGAAATTA 
    AAGCAGCCTC CCTTTTGTAT ACTCTGATAG TCTCTGATAG ATTGTGAACA 
    AAGCCAACAT ATTAAAGTGT TGTTAAGTAA GAAACTTGGA AACCACAGTT 
    TTTTTAATTT AAATAAGCCC ATTAACATCT TCAATGGACC GAATAAAGGC 
    CCATAAGAGA CCACCTCCCT CGCTTTTTTT AACAATTGGC GGGTAAAATT 
    CTAAAATTTT AGTTTCAGTT GATGAACCAA AAACAGAAGA AGAAGAAAAT 
    TAACGAAATT TTAAAATCGG AACAAATTTC AGAAATTTGG CGCACAAAGA 
    AGTCAATTGG CGGGTAAATA TCAATTTCTT ATGCCTTTAA TT

AT3G14740.1

Model type
Protein coding
Short Description
RING/FYVE/PHD zinc finger superfamily protein
Computational Description
RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 3447 Blast hits to 3310 proteins in 215 species: Archae - 0; Bacteria - 0; Metazoa - 1911; Fungi - 561; Plants - 635; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G14740.2

Model type
Protein coding
Short Description
RING/FYVE/PHD zinc finger superfamily protein
Computational Description
RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G14750.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67170.1); Has 4036 Blast hits to 3091 proteins in 519 species: Archae - 61; Bacteria - 669; Metazoa - 1503; Fungi - 255; Plants - 421; Viruses - 4; Other Eukaryotes - 1123 (source: NCBI BLink).
Link
InterPro Scan - TAIR