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ET13875

CSHL Arabidopsis genetrap mutant lines

Original: ET13875

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13875

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 328402 [Map]; Strand: w
      • AT2G01740.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -587; Region: promoter
      • AT2G01750.1 - [+] show detail - microtubule-associated proteins 70-3
        Distance: 0; Region: exon2 (CDS)
      • AT2G01750.2 - [+] show detail - microtubule-associated proteins 70-3
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13875 - 3-prime edge
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACTC 
    ACTCGCCGTT GGTCTTCCAT TGTTAACCTC AAACGCATAT CCACCTTCCT
    CCATTTATTC CCGATCTATA AAACCCTTAC TTCTCTAATC TACACAGGCA
    TCAAAAGTTC CATATCTATT GAAGTCTCAA ATCCATCCAC CAGAAACAAA
    AAAAAAATCA CCCCTTCCCT AAAATCAGCA CATTCTCAAA TCGAGAAAGC
    AAAAGGTAAA AATAAAACGC GCAACAACCC TGAATCGTCA AAAAAAACTG
    ATGAACCAAA GGGGTTAGGG TTTGAATTCG GTTTCCCCGG AAATTCTACA
    AAAACAAAAA AAAAATAGCA GGTTTTTTTG GGAAAAAAAG GATTAAAAAA
    AGGTTTATGC TAAGTCCCAG CGGGAAAAGA GAGAAAATTC CCGTTTTCAA
    ATTTTTTTAA CATTTCCAGG TTAATTAAAA AAAAAGCTTA CAATTAACCG
    CTGTCTTTAA AAACCAAACA ACGGTTTTCT TAAACTTTCA AGGGTTAAAC
    CCTTCTCCGT AAAATTAAGT TTGAAGGTTA AAAAATTTTT TCAAAGTTGA
    AACCTTTCAA ATCTTCTAAA AAAACC
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 328455 [Map]; Strand: w
      • AT2G01740.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -640; Region: promoter
      • AT2G01750.1 - [+] show detail - microtubule-associated proteins 70-3
        Distance: 0; Region: exon2 (CDS)
      • AT2G01750.2 - [+] show detail - microtubule-associated proteins 70-3
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13875 - 5-prime edge
    TCCTACTTTC TCCCTGCGAG TGAGTTTGGT ACGACGGCGA GGATTTCGTC 
    ACCGTCATTG ACTATGTCAT CGTCTTTCCG TGAAGGAGGA GGAGGAGGTG
    GAAGTAAGGG TTTAACACGA CGGAGGTCAA TGAAGCCGAG TTTTGACGCC
    GATAATGAGT TCATTACTTT ACTCCATGGC TCAGATCCGG TTAAAGTTGA
    GCTTAATAGG CTTGAGAACG ATGTCAGAGG TACTCTATGA TTCTCGATCT
    GTTTTATTCT ATTGGTTGAT TTCAAGTTTC CGTTGACATT TTTGATTTTG
    TAATTTGGTA TAATTAGGTT TTTGGATATA TGTTTGAACT TTTCCGTACG
    TGCATGAATG TCATTTCTTG GTTTTAAACT TTGACTTTTT GGTGCTCAGA
    TAAAGATCGG GAGTTGTCTG AATCCCAAGC TGAGATCAAA GCATTGAGGT
    TGTCTGAACG GCAAAGAGAG AAGGCTGTTG AAGAGGTTAG TGTAATATCT
    GCACTTAATC TGTCTTTTTC CTTACATTTC ACAATGTCCT GTAAAGGTTG
    TTTGGATTAG ACTTGATTCA ACTGAATATT TCACATGAAC AGAAGATTGA
    AGATATAGCT TGACGTAATG GATTATTTGT TTGGGTCTAA TCAATGGTTA
    GGAAGAAGTT AAATTTGTGA AGCACAATTT CAATATTTAG ATTCTGAAAA
    ATGTTATCCT TCGGCTCTAA GTTTTTGCGC AAGTTGCATT ATGTAGTATA
    GGTGGTTGAA CTGAATTACT CTTGG

AT2G01740.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G02150.1); Has 57588 Blast hits to 14618 proteins in 307 species: Archae - 5; Bacteria - 72; Metazoa - 670; Fungi - 805; Plants - 54302; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01750.1

Model type
Protein coding
Short Description
microtubule-associated proteins 70-3
Curator Summary
Encodes a microtubule associated protein (MAP70-3). Expressed in all tissues.
Computational Description
microtubule-associated proteins 70-3 (MAP70-3); FUNCTIONS IN: microtubule binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: microtubule, plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-4 (TAIR:AT1G14840.1); Has 32985 Blast hits to 20590 proteins in 1788 species: Archae - 429; Bacteria - 4222; Metazoa - 17320; Fungi - 2752; Plants - 1806; Viruses - 150; Other Eukaryotes - 6306 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01750.2

Model type
Protein coding
Short Description
microtubule-associated proteins 70-3
Curator Summary
Encodes a microtubule associated protein (MAP70-3). Expressed in all tissues.
Computational Description
microtubule-associated proteins 70-3 (MAP70-3); FUNCTIONS IN: microtubule binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: microtubule; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-4 (TAIR:AT1G14840.1).
Link
InterPro Scan - TAIR