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ET13879

CSHL Arabidopsis genetrap mutant lines

Original: ET13879

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13879

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16321303 [Map]; Strand: c
      • AT3G44770.2 - [+] show detail - Protein of unknown function (DUF626)
        Distance: 2992; Region: intergenic
      • AT3G44780.1 - [+] show detail - Cysteine proteinases superfamily protein
        Distance: 298; Region: intergenic
    Flanking Genome Sequence: ET13879 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAACTCA 
    TTTGTTTAGA TTTGTGATGT AGTTCATCTG TTTATATTTG CACCGTAATT 
    AGTTTTGATA TGTTAGAAAT TTACCTTTAA TAATCTTTGT TATTTGTTTC 
    ACTGCCGTAT ATTAAGAACA ATGAACCAAC TTGTGATTAT TTTGATATGT 
    ACAAAATTTG ACCTTTCATT AATATTTGCT ATTTGTTAAA CTATGTTTTT 
    CATTTTTTCA TTAATATTTG CTATTTGTTC TACTATGTT

AT3G44770.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF626)
Computational Description
Protein of unknown function (DUF626); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF626, Arabidopsis thaliana (InterPro:IPR006462); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF626) (TAIR:AT4G29550.1); Has 177 Blast hits to 176 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G44780.1

Model type
Protein coding
Short Description
Cysteine proteinases superfamily protein
Computational Description
Cysteine proteinases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19515.2); Has 19 Blast hits to 19 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR