1. Home
  2. Mutant Lines
  3. ET13880

ET13880

CSHL Arabidopsis genetrap mutant lines

Original: ET13880

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13880

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16321303 [Map]; Strand: c
      • AT3G44770.2 - [+] show detail - Protein of unknown function (DUF626)
        Distance: 2992; Region: intergenic
      • AT3G44780.1 - [+] show detail - Cysteine proteinases superfamily protein
        Distance: 298; Region: intergenic
    Flanking Genome Sequence: ET13880 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAACTCA 
    TTTGTTTAGA TTTGTGATGT AGTTCATCTG TTTATATTTG CACCGTAATT 
    AGTTTTGATA TGTTAGAAAT TTACCTTTAA TAATCTTTGT TATTTGTTTC 
    ACTGCCGTAT ATTAAGAACA ATGAACCAAC TTGTGATTAT TTTGATATGT 
    ACAAAATTTG ACCTTTCATT AATATTTGCT ATTTGTTAAA CTATGTTTTT 
    CATTTTTTCA TTAATATTTG CTATTTGTTC TACTATGTT

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: ET13880 - 5-prime edge 
    TCCTACTTTC TCCCTGAATG AGTTACCACA GTTGGTTCTC TGAAGATATA 
    GTGCTTGTGA GTTGTGATGT GATCTTTTTG CTTTCTATGA TTAGCTTTGA 
    TGGCTTTGAT ATTGTTGGAC ATATATAGTT TCAAAACAAA ATATTTATAT 
    ATTGTAATTT ATTTTCTATG ATGTTGTAGG GAATGAACCA TCTAAACAAA 
    ACATATTTAC AAAAGTATTG TGGCACTTTT CATGCCTCAA AGATTGAGGA 
    GTAAGCTAGG AACTTATCAT TCTAGAACTC GGTTACCCGA ATAACAAGTA 
    TATGTCTCCA AATGATCTAA TCCTACTAAC TAAATCTCAT ATAATAAGTG 
    ATAGTGATGG TTTATTAGGA AATATATATA TCTGTTATTT GAGCTTTGCT 
    GATTTTGTTG AGAGTTTATT AAGTATGTTA CCCTCAATTA ATTTCTATAA 
    ACTTTTTTTG ACTCTTAGGT GTGGATCAAC AGAGGGATGA TTCTTCTACA 
    TCAAATTTCA TGTATAAGGT ATATTTGGAA ACGAGAGACT TGACTAATAT 
    TTTGGAGCAA AAGAGCTCGC ATATAACCCG CCT

AT3G44770.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF626)
Computational Description
Protein of unknown function (DUF626); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF626, Arabidopsis thaliana (InterPro:IPR006462); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF626) (TAIR:AT4G29550.1); Has 177 Blast hits to 176 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G44780.1

Model type
Protein coding
Short Description
Cysteine proteinases superfamily protein
Computational Description
Cysteine proteinases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19515.2); Has 19 Blast hits to 19 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR