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ET13902

CSHL Arabidopsis genetrap mutant lines

Original: ET13902

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13902

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 374495 [Map]; Strand: w
      • AT4G00890.1 - [+] show detail - proline-rich family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13902 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGC 
    CACCACCATC TCCGACGGCA CAGATATCAC TATCGTCTCT GAAATCACCA 
    ATTCCTTCTC CAGCTACGAT CACCGCACCA GCGCCGCCGT TTTCTTCACC 
    ACTCTCCCAA ACTACACCGT CACCTAAACC ATCGTTACCC CAAATTGAAC 
    CAAACCAAAT CAAATCTCCT TCTCCAAAAC TCACAAACAC CGAATCTCAC 
    GCTTCACCAG AGCAGAATCT AGTGAAACCT GACGCCAACC TCATGAACAA 
    GATTCCGGCT AAAAACGAAG TTCCGAAAAA CAGGGGAACA TTAGAGAAAA 
    AAACAGAGCC AATGATTATG ATGTTCATAA ACAGTAACGT CCAAGGATTC 
    AACACTTCTC TTTCGCTTGA TTCATCTTCC ATCGATAATA AACCAGGCGT 
    CCACTTGACG ATCGATTATG ATCAAAGTTG TGATTTTTCT TAACCACTGT 
    TTTAAATAAT TGCACATATT GTAATACAAT CGTCTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 374552 [Map]; Strand: w
      • AT4G00890.1 - [+] show detail - proline-rich family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13902 - 5-prime edge 
    CTTTCTCCCT GGTGGTGGCA TAGGTGATTT AGATTGGTGG TTTTCACTAG 
    CTTTCGGCGA CACAGTGGCG GTGGTGATGG TGATGAGTGT GTCTGAGATC 
    TTGCTTGTTT ATCAGATTTT GGTGGCGAAA TCGGCGGTGA TTGGGACCTT 
    GTTTCATTTT CATCAATGGA TTTAGACGGC AAAGGAGGTG GAGACGATGC 
    TTGCGACATA AGCGGTGATC GGAGCCGAGT TTCGTCTATG GATTTAGACG 
    GCAAAAGCGG TGGTTTCGGT TGGGACTCGA ATTCTTCAGT AGCGTTTAAC 
    ATCATTGACG GCGAAGACGG TGGAGTTTTG GCTTCTTGTG GTGGTGGTAT 
    AGGTAGTTGA GTTTCATCAC CAGTTTCTGT TAATGTTGGA GGCGATGGTC 
    GGAACCAAGT TTCAACGATA GATTCAAGCG GTGGAGACGG TTGGGACTGA 
    GATTCTTTGG TAGCCTTTAG CGTTGGAGAG GGGGACAATG GTGTTTTTGG 
    TTCTGTTGTT AGCGGTCGAA GAGGCACTGA TGCTAGAAAT TGCTGCTGAG 
    ATTTAGTGGA TACTGGCGGC GACTTAGGTG GTGATTGGAT AAGTAGATTT 
    CGATTTGTTT TGACATGTTT TGACATCAGT GGTGTCATTG GCTGCGATTG 
    AGGCTCTTCC TTTGATTTTG GTGATAACGG CGACNAGGGT AAAGACTTTG 
    GTTCCGGTGG TGATTGTGGA TGAAATAGCG GTGACTGGTG GTGGTGATTG 
    AGACAAAGTG TCTTGA

AT4G00890.1

Model type
Protein coding
Short Description
proline-rich family protein
Curator Summary
Encodes a putative glycosyl hydrolase family 10 protein (xylanase).
Computational Description
proline-rich family protein; Has 74402 Blast hits to 44432 proteins in 1604 species: Archae - 100; Bacteria - 7075; Metazoa - 32308; Fungi - 16616; Plants - 5983; Viruses - 2030; Other Eukaryotes - 10290 (source: NCBI BLink).
Link
InterPro Scan - TAIR