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Mutant Lines
ET13904

ET13904

CSHL Arabidopsis genetrap mutant lines

Original: ET13904

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13904

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 19669769 [Map]; Strand: c
  - AT2G48090.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: -5; Region: promoter
  - AT2G48100.1 - [+] show detail - Exonuclease family protein
    Distance: -732; Region: promoter
  - AT2G48100.4 - [+] show detail - Exonuclease family protein
    Distance: -732; Region: promoter
  - AT2G48100.3 - [+] show detail - Exonuclease family protein
    Distance: -786; Region: promoter
  - AT2G48100.2 - [+] show detail - Exonuclease family protein
    Distance: -916; Region: promoter
Flanking Genome Sequence: ET13904 - 3-prime edge
```
AGTTCTTTGC CATGGATGTC ACCTTGGGAA GTACTAAAGG TGATCTGTGC 
AGAGAAGATA GTGACATTAA CGAGCTTTTT ATAATGCAAA ATCTATGTGA 
TTTTATCTTT GTTAATTGCA GAATAACGTG TTTCAACATG CAACAAGCGA 
AGAAATTACA ACTTGTTGAA AAGAGGAAAG TTGGAAACTT TTACAAGTTT 
TTCAAAAAAG GAAGAGTGAT GTTAGAAAGG GATCGGATTC TGATTCCACT 
ATGTTTTCTT TCTTTCTTTC TTCTTCGGTG TTTTTGTTTT GGATTGTTAC 
GTTCCTGTCA GGATTTGAGA ATCATGCATC AGCTGTCACT CCTCTCAGGA 
GGGGGAGATT ATATCTACGT GTAACATAGT AATCTTCCAA TAAATAAGCA 
CTTCACATAT TAT
```
5 prime edge [+] show sequence
1. Chromosome: 2; Position: 19669528 [Map]; Strand: c
  - AT2G48090.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: 0; Region: exon1 (CDS)
  - AT2G48100.1 - [+] show detail - Exonuclease family protein
    Distance: -973; Region: promoter
  - AT2G48100.4 - [+] show detail - Exonuclease family protein
    Distance: -973; Region: promoter
Flanking Genome Sequence: ET13904 - 5-prime edge
```
CAGAGGCTGT TCGCGTCAAA TTTGCAGAGA CATCGGCTAG GCCTAGGGCA 
GCCAAACCCA TTACAAAGGT GGAACCGGTG ATCGCTCGAG TGGATACTAC 
GATCAAAACG GACGAGAGGT TCACCGAGTA TATAAAGAAA GCGAAGCTGA 
AGATAAGGGC GATGACGAAT GTCGGTGATA TGATGAAGGA GGATGCGTGG 
GAGACAAGTG ATGAAACAGA TCAGACACGT CATGATCATC GTCACCACCA 
TGGGCCTATC TC
```

AT2G48090.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, root, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G48100.1

Model type: Protein coding
Short Description: Exonuclease family protein
Computational Description: Exonuclease family protein; FUNCTIONS IN: exonuclease activity, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Zinc finger, C2H2-type (InterPro:IPR007087), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Exonuclease family protein (TAIR:AT5G40310.1); Has 1569 Blast hits to 1569 proteins in 234 species: Archae - 0; Bacteria - 15; Metazoa - 734; Fungi - 438; Plants - 246; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G48100.2

Model type: Protein coding
Short Description: Exonuclease family protein
Computational Description: Exonuclease family protein; FUNCTIONS IN: zinc ion binding, exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Zinc finger, C2H2-type (InterPro:IPR007087), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Exonuclease family protein (TAIR:AT5G40310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G48100.3

Model type: Protein coding
Short Description: Exonuclease family protein
Computational Description: Exonuclease family protein; FUNCTIONS IN: exonuclease activity, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Zinc finger, C2H2-type (InterPro:IPR007087), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Exonuclease family protein (TAIR:AT5G40310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G48100.4

Model type: Protein coding
Short Description: Exonuclease family protein
Computational Description: Exonuclease family protein; FUNCTIONS IN: exonuclease activity, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Zinc finger, C2H2-type (InterPro:IPR007087), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Exonuclease family protein (TAIR:AT3G27970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR